Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01010 ATGGATTTTGTAGAAGTGGATTCAGACAAGGGAAACGAGGCCGCTCATAGCTGTCTAGAAGAGAGTACAAGTATATTTGATGGAGTTGAAGTTCAAGAGCCATCTGTGGGTATGGAATTTGATTCCGAAGAAGCTGCTAGGAATTTTTATGTTGCATATGCTAGACAGGTAGGATTTGCTGTACGTGTTATGCAACGTCGACGTTCTGGAATTGATGGCAGGACTCTTGCCCGTCGACTTGGATGTAACAAGCAAGGATTCTCACCCAATAACAAGGGAACATTGCGGCATGATAAAAGACCAAAGCCTAGTGCCCGAGAAGGTTGCAAGGCAACAATTTTAGTTAAGATGGAAAAATCTGGAAAATGGGTTGTCACAAGATTTATAAAGGATCACAACCATCCTCTAAATGCTACAGCTAATGGTTTCAGTACAGAAGACGATAAAGATAAGAAAATTGCAGAACTCACTATGGAGTTGGAGCACCAAGATGAACTATGTGCTGCATATAGAGGAAAATTACTCAGCTTCATAAACAATGTTGAGGAGCAAACAGAAGAAATGTCCACAAGAATTCAACTCATTATTAAAAATATAAAGAGAGCTGAATCTGAAATGCAAATATGTTCACAGAACTGA 639 0.3959 MDFVEVDSDKGNEAAHSCLEESTSIFDGVEVQEPSVGMEFDSEEAARNFYVAYARQVGFAVRVMQRRRSGIDGRTLARRLGCNKQGFSPNNKGTLRHDKRPKPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLNATANGFSTEDDKDKKIAELTMELEHQDELCAAYRGKLLSFINNVEEQTEEMSTRIQLIIKNIKRAESEMQICSQN 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01010 212 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 9 200 - -
Trre13g01010 212 MobiDBLite consensus disorder prediction 83 105 - -
Trre13g01010 212 Pfam FAR1 DNA-binding domain 48 137 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01010 Trre-Chr13 8146238 8147472 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre13g01010 FAR1 1.8e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01010 - - mtr:112416292 362.073