Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00974 ATGCCAATGAGAGGCTTCAACAACATTTCATTCGACGTCTTTTTAAACTGGAGCAGCAGCTTTCTAATTTTTCCCTCTGAGCTGGCTATAGGGCTACTCTCTCCGTTGGACGAGGAATCAAATTTTCCGAGGGCCACTGATCTAACACTTGCCAACAAACTCAGGCAGCACCTGCAAACTAATCCTTACTTCAAAGGGGACTGGGGAAGAGGTTTCAGTGTTTGTCATTATGCAGGAGAGGTTTTGTATGATACAAGTGGGGTTCTAGAAAAGAACAAAGATCCAATGCCTTCCGATTCCATTCAACTACTATCATCATGTAGTTGCAAACTGCTGCAACCGTTCTCCAAGACGCTTAACGACCAGTCTCAGAAGCAATCAAATTCTCAGCACGCAGGTGCTTTTGATTCGCAAAAGCAGAGTGTTGGCACAAAGTTCAAGGTAATGCCAGATCTAGGAGGAAAATGTTAA 471 0.4395 MPMRGFNNISFDVFLNWSSSFLIFPSELAIGLLSPLDEESNFPRATDLTLANKLRQHLQTNPYFKGDWGRGFSVCHYAGEVLYDTSGVLEKNKDPMPSDSIQLLSSCSCKLLQPFSKTLNDQSQKQSNSQHAGAFDSQKQSVGTKFKVMPDLGGKC 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00974 156 ProSiteProfiles Myosin motor domain profile. 1 156 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre13g00974 156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 147 IPR027417 -
Trre13g00974 156 Gene3D - 9 151 - -
Trre13g00974 156 Pfam Myosin head (motor domain) 29 147 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre13g00974 156 PANTHER MYOSIN 30 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00974 Trre-Chr13 7958824 7959847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00974 30 147 Myosins gene family AT5G54280 64.407 1.39e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00974 K10357 - gmx:100819335 187.578