Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00848 ATGATGATGAATCCTCATATGTTTTTCTGTTACCTTACAGCATTGTTTCACTTGATTTTCATCACACTTGCTCAATCAGAAAACTATATCATACATATGAACCTATCAGCCATGCCTAAACCTTTTCTGACACAACATGCTTGGTACATTTCCACTCTTTCTTCTGCATTACAAAACCCTCATCTCAAAACAACAACCAAGTTCATTTACAGTTACACACATGTTATGAATGGTTTTAGTGCTAATCTAAGACCAGAAGAACATGAAGCTATCAAAAACTCTCTAGGATATATATCATCCATGAAAGATCTGAAAATGAAACTACTCACAACATATTCACCTAAATTCCTCGGTCTTAATCCCAACGTTGGTGCTTGGCATGATTCAAGGTTTGGTAAAGGTATAATTATTGGTTTGGTTGACTCTGGAATTTGGCCAGAGAGCAAGAGTTTCAAAGATTACAACATGTCAAAAATTCCTTCAAAATGGAAAGGAGAGTGTGAAAATAGCATCCATTTTAATTCATCTCTTTGTAACAAGAAGCTCATTGGAGCTAAATTCTTCAACAGAGGGTTATTAGCACATGATCCCAATGCAAGCTTAGGTTTAAACTCCACTCGTGACACAGATGGTCATGGAACCCACACTATATCAATCGCAGCTGGAAGCAGAGTAGAATCTGTTTCTTACTTTGGCTATGCAGCTGGAACAGCTTCAGGAGTGGCTTCAAATTCGCATGTTGCAGTGTATAAGGCTGTATGGAAAGAAGGGTTGTATTCATCTGATGTAATAGCTGCAATTGACGCCGCAATATCGGACGGTATTGATGTTCTTTCGTTGTCAATTCATGTTGCAGATTTTGTACCTTTGTATGAAGATCCACTAGCCATAGCAACATTTGCAGCTATGAAAAAAGGTGTTTTTGTCTCGTCTGCAGCCGGAAATGGAGGTCCTGACCTTGAAACTCTTTACAATGGAATGCCTTGGGCTATAACTGTTGCTGCAGGTACTATGGATAGAGATTTTCAAGGGACTCTTACTCTTGGAAATGGTAACAAAGTCATAGGATTTTCTTCGTATGTAGGAACATTTTCTTCACATAATGTTCCTATTGTTTTCATGGGTTTATGTGACAATGTTAACGAATTGAAAAAAATGAAGAGAAAGATTGTGGTGTGTGAAGCCAAGAATGGAACTAGCCTTTTAGATCAAGCTGGTAATTTGGATGTAGCAAAAGTTTATGGAGCTGTTTTGATTTCAAATGCCGCAGACACATTCTATTCATCGGATGATTACACAATCGCTTTCCAGAATAGTTTGGCAGCCATCTTTGTTGTTCCATTAAATGGGGAAATCATCAAAGCCTACATCAAGAGTTATTACAACTCCAATCACTCTTCAATAGCAAGCATGTCTTTTAGGAAAACAGGTTTTGGTCTTAAAACAGCACCTAAGGTTGATTATTATAGTTCAAGAGGTCCATCATATAGCTGTCCATTTGTGTTGAAACCAGATATTACTGCGCCTGGTACTTCGATCTTAGCGGCATGGCCTTCAAATGTCCCGGTGTCCCAAATATATTTTAGAGATTTCAATGTGGACAGTGGAACATCTATGGCCAGTCCTCATATTGCTGGTGTTGCGGCGCTTGTGAAAGGCGCACACCGTAATTGGAGCCCTGCGGCTATTCGGTCGGCAATAATGACAACATCAGATATATTGGATAGTGCAAAGGAACACATCAAAGACATTGGAACAGGCAGCAGAGCAACACCTTTTGCATTGGGAGCTGGACATGTTAATCCTAATAGAGCACTTCACCCAGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTCAACTTCACACAGAAAAACATCGCTGTCGTTACAAGATCCTCTTCCAATGATTGCTCTAAACCTTCATTGGATCTTAACTACCCTTCTTTTGTTGCTTTTTTCAATGGTGAAAATTCTTCTGCAAAGACAAACCAAGAATTTTATAGAACAGTTACCAATGTTGGTGGTGATGGACAAGCAACTTATGTTGCTAGCATTACTCCAATTAAAGGGTTTCGTGTCACTGTTATCCCAAACAAGCTGGTTTTCAATGAAAAGAATGAGAAGCTAAGCTACAAGTTGAGGATTGAAGTTGCAACAACTACAAAATTAAAGAAAGTGGATTTTGGATATCTAACTTGGATGGATGTGAAGAAACATGTTGTTAGGAGTCCAATTGTGGTCACGACCCTCAAATTGAAATCCTAG 2286 0.3876 MMMNPHMFFCYLTALFHLIFITLAQSENYIIHMNLSAMPKPFLTQHAWYISTLSSALQNPHLKTTTKFIYSYTHVMNGFSANLRPEEHEAIKNSLGYISSMKDLKMKLLTTYSPKFLGLNPNVGAWHDSRFGKGIIIGLVDSGIWPESKSFKDYNMSKIPSKWKGECENSIHFNSSLCNKKLIGAKFFNRGLLAHDPNASLGLNSTRDTDGHGTHTISIAAGSRVESVSYFGYAAGTASGVASNSHVAVYKAVWKEGLYSSDVIAAIDAAISDGIDVLSLSIHVADFVPLYEDPLAIATFAAMKKGVFVSSAAGNGGPDLETLYNGMPWAITVAAGTMDRDFQGTLTLGNGNKVIGFSSYVGTFSSHNVPIVFMGLCDNVNELKKMKRKIVVCEAKNGTSLLDQAGNLDVAKVYGAVLISNAADTFYSSDDYTIAFQNSLAAIFVVPLNGEIIKAYIKSYYNSNHSSIASMSFRKTGFGLKTAPKVDYYSSRGPSYSCPFVLKPDITAPGTSILAAWPSNVPVSQIYFRDFNVDSGTSMASPHIAGVAALVKGAHRNWSPAAIRSAIMTTSDILDSAKEHIKDIGTGSRATPFALGAGHVNPNRALHPGLVYDVGVQDYVNLLCALNFTQKNIAVVTRSSSNDCSKPSLDLNYPSFVAFFNGENSSAKTNQEFYRTVTNVGGDGQATYVASITPIKGFRVTVIPNKLVFNEKNEKLSYKLRIEVATTTKLKKVDFGYLTWMDVKKHVVRSPIVVTTLKLKS 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00848 761 Gene3D - 339 478 - -
Trre13g00848 761 Pfam Subtilase family 132 577 IPR000209 GO:0006508|GO:0008236
Trre13g00848 761 Gene3D Peptidase S8/S53 domain 134 619 IPR036852 GO:0004252|GO:0006508
Trre13g00848 761 PRINTS Subtilisin serine protease family (S8) signature 535 551 IPR015500 -
Trre13g00848 761 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Trre13g00848 761 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Trre13g00848 761 Gene3D - 623 757 - -
Trre13g00848 761 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 754 IPR045051 -
Trre13g00848 761 Pfam Peptidase inhibitor I9 29 108 IPR010259 -
Trre13g00848 761 ProSitePatterns Serine proteases, subtilase family, serine active site. 536 546 IPR023828 -
Trre13g00848 761 FunFam Subtilisin-like protease SBT1.9 18 109 - -
Trre13g00848 761 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 108 IPR037045 -
Trre13g00848 761 FunFam Subtilisin-like protease SBT1.5 134 351 - -
Trre13g00848 761 SUPERFAMILY Subtilisin-like 108 610 IPR036852 GO:0004252|GO:0006508
Trre13g00848 761 Pfam Fibronectin type-III domain 650 754 IPR041469 -
Trre13g00848 761 CDD Peptidases_S8_3 107 572 IPR034197 -
Trre13g00848 761 CDD PA_subtilisin_like 345 465 - -
Trre13g00848 761 ProSiteProfiles Serine proteases, subtilase domain profile. 111 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00848 Trre-Chr13 6800362 6802647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00848 12 742 Subtilisin-like Serine Gene Family AT5G67090 46.781 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00848 - - gmx:100786751 941.028