Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00846 ATGGCTATAAGATATTGTTACAAAGATTTGGTTCCTTTTGGTGCTATGGTTACCATGGAATGCATCAACGTTGCCTTGAATACTCTCTTCAAAGCTGCTACCTTAAAAGGAATGAGTTACCATGTTTTTGTTGTTTATGCTTATGCTGTTGCTGCTTTTGTTCTTCTTCCTTCACCCTTTATCTCCAAAAGATCAAGAGTGCTTCCTCCTCTAAGTAAACCCATACTATACAAAATTGGTCTTCTTGGGGTGATAGGAAGTTCATCTCAAATCATGGGGTATACAGGTATTAGTTTAAGTTCTCCCACTCTATCTTCAGCAATTAGCAACTTGGTGCCAGCTTTTACCTTCTTGCTTGCCATCATTTTCAGGATGGAAAAGGTAGCTATAAGAAGTTTAAGTAGTCAAGCAAAGGTGTTGGGCACCATAGTATCAATATCAGGAGCATTTATAGTGACACTATACATAGGACCACCAATCATTATTGCACTCAGATCTTCCCTTCCACTTCATCAACCAATTAACACTCCAAAACCATCAGATCAAAATTGGGCCATTGGTGGCCTTTTATTGACAGCTGAGTATATATTGGTTCCTTTATGGTACATTGTACAGGTACAAATCATGAAGGTGTACCCTGATGAACTAACAGTGATCTTCTATTACAATTTATGTGTAAGCATTATAGCTGCAATCGTAGGGGTGATCAGTGAGCCAAATGCAAGTGCTTGGAAAATAGGACTCGATACATCACTTGCATCCATTGTTTGCTCGGGAATTTTTGGATCATTCTTGAACAATACAGTTCATGCATATGTACTTCGTATAAAGGGGGCCGTATATGTTGCAATGTTCAAACCACTCTCAATTGTCATAGCTGTTGCCATGGGAGTTGTGTTCCTTGGTGATACTCTCCACCTTGGAAGTTTAATTGGAGCAACAATAATATCAATTGGATTTTATACTGTAATGTGGGGAAAAGCAACAGAAGAGGTGGTTGAAGATGTCGCTATCCACGAAACACCAACTACACAAAATGTTCCTCTCTTGCAAAGCTATAAAACTGAAGATGAAAACAAAATGCATACAAGTGTATAA 1098 0.3852 MAIRYCYKDLVPFGAMVTMECINVALNTLFKAATLKGMSYHVFVVYAYAVAAFVLLPSPFISKRSRVLPPLSKPILYKIGLLGVIGSSSQIMGYTGISLSSPTLSSAISNLVPAFTFLLAIIFRMEKVAIRSLSSQAKVLGTIVSISGAFIVTLYIGPPIIIALRSSLPLHQPINTPKPSDQNWAIGGLLLTAEYILVPLWYIVQVQIMKVYPDELTVIFYYNLCVSIIAAIVGVISEPNASAWKIGLDTSLASIVCSGIFGSFLNNTVHAYVLRIKGAVYVAMFKPLSIVIAVAMGVVFLGDTLHLGSLIGATIISIGFYTVMWGKATEEVVEDVAIHETPTTQNVPLLQSYKTEDENKMHTSV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00846 365 PANTHER WAT1-RELATED PROTEIN 9 341 IPR030184 GO:0016020|GO:0022857
Trre13g00846 365 Pfam EamA-like transporter family 201 324 IPR000620 GO:0016020
Trre13g00846 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00846 Trre-Chr13 6782514 6786527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00846 1 358 Nodulin-like Gene Family AT3G28050 58.491 1.98e-140 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00846 - - gmx:100801438 545.043