Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00839 ATGGAAATGCAGTGGGTCTACATTTCTACTGCCACTTTTTTTACATGCTACCTCTTTCTTAACATATTTGTGAGGAAGTTTAATGGTTGGTATTATCATCTCAAATTCAGAAACAAGGAGTACCCTTTGCCTCATGGTGACATGGGATGGCCTTTTATTGGCAATCTATTAACATTCTATAAAGATTTCTCATCTGGCCAACCAGATTCATTCATTACCAACCTCAATCTCAAATATGGAAAAAAGGGTATCTACAAGACTCACTTGTTTGGAAATCCAAGTATCATAATTTGTGAGCCAAAAATGTGTAAGAAAGTGCTCACCGATGATGTGAACTTTAAGTTTGGTTATCCAAAATCCTTCAAAGTGTTGACAAAAACTAAACCCAATGATGTATCTATGTTGGAACATAAGCATCTACGACGACTAATTTTTGGTCCCATCATTGGTCACAAGGAAATGGCAATGTACTTAGAACATATCGAGGATATTGTGATCAATTCCTTAGAAGAACTATCGAGCATGAATCACCCCATTGAATTGTTGAAAGAGATGAAAAAGGTTTCATTTAAAACCATTGTCCATGTTTTCTTGGGCTCTTCTAATCAAGATATTATTAAAATCCTTGGAAGTTTAAGTAATGATATGTTTAATGGCTTGTTCTCGATCGCCATCAATGCACCTGGTTTTGCTTTCAACAAAGCACTCAAGTCACGCAAGAAGATAATCAAAATAGTTCAACCTCTTGTGAATGAAAGGAGATTGATGATAAAAAATGGTAAACAAGTGGGAGAGAAAAAGGATTTTATAGATAGTCTCTTGGAAGTACTCAAAGATGAGAATGGTAAAAAAATAGAGGATGGGGAAATTAGTGACTTACTCATAGCATTTTTAATTGCTGGACATGAACCCACAGCAACTGCTCTAATGTGGTCAATTATATATCTTACACAACATCCACATATGCTGAAAAAAGCAAAGGAAGAGCAGGAAGAAATCTTGAGGAAAAGACCTGCCTCCCAAAAACAATTGAGTCTTATTGAAGTCAAGCAAATGGTTTACCTTTCTCGAGTGATCAATGAAATGTTGAGATGTGCCAACGTGACCTTTTCAACTTTTCGAGAGGCAGCATCAGATGTCATCATCAATGGTTATCTCATACCAAAAGGATGGAAAGTGCTAGTGTGGTTGAGAGCTATTCATATGGATTATGAATATTACCCAAATGCAGAAGAGTTTAATCCATCAAGATGA 1254 0.3604 MEMQWVYISTATFFTCYLFLNIFVRKFNGWYYHLKFRNKEYPLPHGDMGWPFIGNLLTFYKDFSSGQPDSFITNLNLKYGKKGIYKTHLFGNPSIIICEPKMCKKVLTDDVNFKFGYPKSFKVLTKTKPNDVSMLEHKHLRRLIFGPIIGHKEMAMYLEHIEDIVINSLEELSSMNHPIELLKEMKKVSFKTIVHVFLGSSNQDIIKILGSLSNDMFNGLFSIAINAPGFAFNKALKSRKKIIKIVQPLVNERRLMIKNGKQVGEKKDFIDSLLEVLKDENGKKIEDGEISDLLIAFLIAGHEPTATALMWSIIYLTQHPHMLKKAKEEQEEILRKRPASQKQLSLIEVKQMVYLSRVINEMLRCANVTFSTFREAASDVIINGYLIPKGWKVLVWLRAIHMDYEYYPNAEEFNPSR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00839 417 PRINTS E-class P450 group IV signature 291 317 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00839 417 PRINTS E-class P450 group IV signature 401 417 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00839 417 PRINTS E-class P450 group IV signature 385 399 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00839 417 PRINTS E-class P450 group IV signature 352 368 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00839 417 Pfam Cytochrome P450 44 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00839 417 SUPERFAMILY Cytochrome P450 38 417 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00839 417 Gene3D Cytochrome P450 34 417 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00839 417 PANTHER CYTOCHROME P450 26 40 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00839 Trre-Chr13 6706212 6716540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00839 20 417 Cytochrome P450 AT1G05160 43.860 1.23e-122 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00839 K04123 - ag:BAG68929 617.076