Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre13g00838 | ATGCCTCCAAAGAAGAAACTCAACACTTCATCATCTTCCAAAAAACCCAATCCACAACCTTCCAAATACGGTATTCAACACTTCTTCGATCGTCACGCAACTCAACAACAATCTCAGAAACTTCAATCTAACAATTCAACCTCTCAGGCTGTTGCTTCCGATTCTCTTCCACCGCCGGGAAAACCTAAAGACGCCGATGCTCCGTCAGGTGCATCTTTGCAGGGCAGTACACCTAATGATTCAGTGTTACCGGCGGTCACTGATGTTACAGATAACCTCTCTGAGGTGTCTCCGGAGATTTCTAAGTCTATGTCGCGCAAACGTTTCAAATTCTCACCTGGAATGTTTATCAAGCAAAGTCAGGATGATGGGGCTGATGAGGTTACATGGAAGATATCTCCAGTGAATGAAAGGCTTCAAGCAGTTTCAAAACACACGCCTAAGATAATTCAAGCATTGGCTGATTCTTCGAGGGCCAACATGTTGCTAATTCAACGCTGCTCAGAAGATAAGACTTCTCTGGACAAAGGTGCCAAGGTTGAACAGTTGCTTATTACACCAACTCCTAGTGCATCTGCAAAAGCTCCGTTGTCATTGAGTAAATTGGGCTTGAAAAAATTAAACCCTGACCGAGATGTGGATTTTAATTGCAATCCAACTACTTTGAGCAACTCTTCAGTGTCTGCTGACAGAAATCCCTTCAGAACTCCACCATCTTTGTCTTGTCGCGTAGATAAGCTTGCCAAGGATGCTGAGCACAACGGACCATCTGACCAGCCTTTTTTGAGGCAGCACAAAAAGGTGTTGCTTGAACTTTTAGATCAAGTCGAAGATGCAATTGGTGTTGATAATGATACAGTTTGTGATAAAAACGCACACTCCTTTAAATCGCAAGATGACTTTGCTAACAAGCTCCCCGTCAAAGTTAACCATCTAGCTGAAAGGACAACATCACATATACCTAAAGAAGTTGTTGGTGTTTTCTCCAATTCTAGTTACTTGGTTTTGGAGGTATCTGAAAAATTGCAACCTGCTGCTGAAGGCCCATACAAGGTGCTTCGTTTACTAAATGAACAAACTGGAGAAGAGCGGGCTGTAAATTTGTGGGATGAATGGTCTTACAGTGTAATTGCCCCTGGAGATACTGTGAATGTAATTGGTCAATTTGATGAAGGGGGAAATTGTGATATTAATCATGATAATAATTTTTTGATTGTACACCCAGATATTCTTGTGTCTGGAACACGGGTTGCTGCCAGTTTTAGTTGCCCAAGGAGAACCGTCTTAGATGAGAGACTAAAATCCAATGAGCACTCAAGTGTAGCTTTATGTGGAACCTTGCTTCATCAAATTTTTCAGGCTGGGCTTACAAATGACAATCCTACAATAGACTTCTTAGAATGTTACACAGAAGTGGTTTTACAGAGAAATGTTGAAAGTTTATTTGCATGTGGAGTAAATGAAAAGGATGTTCGCAAAACCATGATTGATGCTATCCCTAGAATATACAGTTGGATTATGCTGTTCAGAAATATGAAGGAAAGAGAAGACCCTAACGTTAATTTTGGATGTGTTAATGGAATGAAGAACGTTGGCATTTCTGAGGCAAGCTCTAATTTGCTATCTTGTGTAATTGATATTGAAGAAATGGCATGGGCACCAAAATATGGTTTGAAAGGGATGATTGATGCTTCGGTTAGAGTGAAGGTTCAATCTAGAAAAGATAAACTAGAGGAGAAGATCATGCCACTAGAGTTCAAAACTGGAAAATCACCTAGTAGCCAGACATCAGTAGAACATAATGCCCAAGTAATTTTGTACACTCTCCTGATGTCTGAAAGGTACCAGAAGACCATTGATTCTGGTCTTCTGTATTATCTCCAAACAGATCAGACACATGGCATCACGATTCAAAGATCTGACATAGTTGGGTTGATAATACGTCGTAATGAGCTAGCAAGTGATATTTTGAAGGCGTTAGTACTGCAACAACTTCCACCGGTGTTACAGAGTCCTAGCATGTGCAGAGGCTGCCGCCATCTTAATGTCTGTAGCATTTATCATAAGGCACATGGTGGAAGCATCGAGAGCAATGAATTGGGAGATGTTTTCAGTTCCAATACTAATCACTTGACATCATCTCATTCTAAGTTCCTCTGCCATTGGGATCATTTGATTGACTTAGAAGCTAAAGGGACTGAGTTTTTAAAGAAAGACATGTGGCGATCATATAATTCGGGGACTCGCAGTGCCGGTGGTGTTTCTTCTATTGTTATTGATGCTTCACAAGGAATGCCATATTCAAAATCTCATGAAAATAATAGTTTCGTTTATCGTTTTGTACCACATGATACTTCTTGCCCCTCTATAGTTTCTGATGATGATCCTTCTAGTGCCTCTGTGAAAAATGATTTAGATCTCACACTGAGAAGTGGTGACTATGTGATATTGAGTAATGAATCAAGCCATCAAACTATTGCAAAAGGGGTGATTTCAGATATTAGTCAGAATCATATATCTGTTTCCTTTTCCAAGCTCTTGAGAATTCCTGGGAGGTCTTCCACGGAACATGATCTCCTTCAGCAAGTTTGGAGAATTGACAAGGATGAAGCTGTGACTTCGTTTGCAATTATGAGGTTTAATCTTGTACAACTTTTTCTACAAAATGATCAAAGTGCTCATCTCCGGAGGATGATTGTTGACCTTGAGGCCCCTAGATTTGACAGTGGTTCTATAGTTAGCCAGGATCCAGCAATATCTTACGTTTGGTCTGAGCAGAGTTTGAATGATGATCAACGTAGAGCGATTCTCAAGATACTTGTAGCAAAAGATTATGCACTTATATTAGGGATGCCTGGAACGGGGAAGACATCCACCATGGTCCATGCTGTGAAAGCCTTGTTGATCAGAGGCACATCCATTTTACTAACAGCATATACAAATTCTGCTGTTGATAATTTACTCATCAAATTAAAAGCTCAGGGCATTGATTTTGTACGTGTTGGAAGACATGGTGTAGTGAATGAAGAGGTCAGAGGGTATTGTCTTTCAGAAACAAACGTACAGACCGTTGAAGATATCAAAAATAGGTTAGAACAAGTCAAAGTTGTTGCAGTTACTTGTTTGGGCATTTCCAGTCCCCTGCTTGCCGACAAGAGATTTGATGTATGCATTATGGATGAAGCCGGACAGACTACTCTGCCGGTGTCCTTGGGCCCTCTAAGATTTGCTTCAACGTTTGTTCTCGTGGGGGATCATTATCAACTGCCACCACTTGTCCATAGTACAGAGGCCCGAGAAAATGGCATGGGGATGAGTTTGTTTTGTAGGCTTTCAGAAGCCCATCCACAGGCGATTTCAGCTTTACAGAGTCAGTACCGTATGTGTCAGGGTATTATGGACTTGTCAAATGCCTTGATATATGGTGACAGATTGAGGTGTGGTTCATCTGAAATAGCTAATGCCAAACTTGAGTTTTCTGGCTTAAACTGCTGTTTGCCTTGGCTAGAAGATGTTTTGAATCCTGGAAGACCAGTGATATTTATTGATACTGATATGTTGCCTGCCTTAGAGGAAAGAGATCAGAAAATTGTAAATAACCCTATGGAAGCTCACATAATTGCTGAGGTTGCAAAGGAATTGGTAAAAAATGGAATTGAAGGAGAGCGCATTGGCATTATTACTCCCTATAATTCACAAGCAAACCTCATCCGGCAAGCTGCATGCATAACGTCCTTGGAGATACATACCATTGACAAATACCAGGGTAGAGATAAAGACTGTATATTATTATCTTTTGTACGGTCTTGTGAGAACCCAACAAGCTGTGTGGCTTCTCTACTCGGAGACTGGCACAGGATAAATGTGGCTCTTACTCGTGCTAAGAGAAAGTTGATCATGGTGGGGTCTCGTAAAACTCTATTGAAGGTTCCACTACTGAAGCTTCTCATTAAGAAAGTTGAAGAGCAATCTGGAATTTTAAGTGTCTCTAAGAAGGATATCTATAGAAATGGTGAACTCATTAGATGTTCTCAAATTGCTTCTTCAAAACAAAAATTAGATGTTCCCAAATGGTGA | 4077 | 0.4069 | MPPKKKLNTSSSSKKPNPQPSKYGIQHFFDRHATQQQSQKLQSNNSTSQAVASDSLPPPGKPKDADAPSGASLQGSTPNDSVLPAVTDVTDNLSEVSPEISKSMSRKRFKFSPGMFIKQSQDDGADEVTWKISPVNERLQAVSKHTPKIIQALADSSRANMLLIQRCSEDKTSLDKGAKVEQLLITPTPSASAKAPLSLSKLGLKKLNPDRDVDFNCNPTTLSNSSVSADRNPFRTPPSLSCRVDKLAKDAEHNGPSDQPFLRQHKKVLLELLDQVEDAIGVDNDTVCDKNAHSFKSQDDFANKLPVKVNHLAERTTSHIPKEVVGVFSNSSYLVLEVSEKLQPAAEGPYKVLRLLNEQTGEERAVNLWDEWSYSVIAPGDTVNVIGQFDEGGNCDINHDNNFLIVHPDILVSGTRVAASFSCPRRTVLDERLKSNEHSSVALCGTLLHQIFQAGLTNDNPTIDFLECYTEVVLQRNVESLFACGVNEKDVRKTMIDAIPRIYSWIMLFRNMKEREDPNVNFGCVNGMKNVGISEASSNLLSCVIDIEEMAWAPKYGLKGMIDASVRVKVQSRKDKLEEKIMPLEFKTGKSPSSQTSVEHNAQVILYTLLMSERYQKTIDSGLLYYLQTDQTHGITIQRSDIVGLIIRRNELASDILKALVLQQLPPVLQSPSMCRGCRHLNVCSIYHKAHGGSIESNELGDVFSSNTNHLTSSHSKFLCHWDHLIDLEAKGTEFLKKDMWRSYNSGTRSAGGVSSIVIDASQGMPYSKSHENNSFVYRFVPHDTSCPSIVSDDDPSSASVKNDLDLTLRSGDYVILSNESSHQTIAKGVISDISQNHISVSFSKLLRIPGRSSTEHDLLQQVWRIDKDEAVTSFAIMRFNLVQLFLQNDQSAHLRRMIVDLEAPRFDSGSIVSQDPAISYVWSEQSLNDDQRRAILKILVAKDYALILGMPGTGKTSTMVHAVKALLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRVGRHGVVNEEVRGYCLSETNVQTVEDIKNRLEQVKVVAVTCLGISSPLLADKRFDVCIMDEAGQTTLPVSLGPLRFASTFVLVGDHYQLPPLVHSTEARENGMGMSLFCRLSEAHPQAISALQSQYRMCQGIMDLSNALIYGDRLRCGSSEIANAKLEFSGLNCCLPWLEDVLNPGRPVIFIDTDMLPALEERDQKIVNNPMEAHIIAEVAKELVKNGIEGERIGIITPYNSQANLIRQAACITSLEIHTIDKYQGRDKDCILLSFVRSCENPTSCVASLLGDWHRINVALTRAKRKLIMVGSRKTLLKVPLLKLLIKKVEEQSGILSVSKKDIYRNGELIRCSQIASSKQKLDVPKW | 1358 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre13g00838 | 1358 | Gene3D | - | 1126 | 1334 | IPR027417 | - | |
| Trre13g00838 | 1358 | Gene3D | - | 855 | 1125 | IPR027417 | - | |
| Trre13g00838 | 1358 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Trre13g00838 | 1358 | MobiDBLite | consensus disorder prediction | 1 | 84 | - | - | |
| Trre13g00838 | 1358 | MobiDBLite | consensus disorder prediction | 30 | 54 | - | - | |
| Trre13g00838 | 1358 | Pfam | DNA replication factor Dna2 | 358 | 568 | IPR014808 | - | |
| Trre13g00838 | 1358 | Gene3D | - | 533 | 685 | IPR011604 | - | |
| Trre13g00838 | 1358 | FunFam | DNA replication ATP-dependent helicase/nuclease DNA2 | 1024 | 1125 | - | - | |
| Trre13g00838 | 1358 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 927 | 1313 | IPR027417 | - | |
| Trre13g00838 | 1358 | MobiDBLite | consensus disorder prediction | 70 | 84 | - | - |
Showing 1 to 10 of 20 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre13g00838 | K10742 | - | gmx:100799415 | 1772.29 |
Showing 1 to 1 of 1 entries