Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00831 ATGGACGTGTTTGGCATTGGAGAAATCATTTTGGCTGTTTCTGTTTTCATTGCAATTCATTATTGGAGACTCAATAGAAACACACCCATCACAATATGGCCTATCATGGGAATGCTACCTAGTTTCATACACAACTTATCCAACTTCCCTGATTATATAAACTCACTTTTGCAACAAAATGGTGGAACATTCATTTTTGAAGGACCATGGTTAACAAGCATGAAGTGTGTTATGACAAGTGACTCCATGAATGTGCAACATATTACAAGCACAAAATTTGAAAACTATGTAAAAGGAAACGATTTCGAAGAAATTTTTGAAGTCCTTGGAGATGGAATTTTTAGGTCTGATTTCCACATTTGGAAGTACAATAGAACACTACTTCATTCAATTTTCAAGCAGGAAAATTTTCAGGTATTTCTTCACAAAACCATTGAAAAAAAAATCTTTAGTTGTCTTCTTGTGTTTCTTGATAATGCTTGTAAAAAAAGGTTGCAAGTGGATTTGCAAGATATTTTTCAAAGGTTAACCTTTGACAATATATGTTGTATAGTTTTAGGATTTGATCCTATTTGTCTTTCTATTGATCTCCCTGAAATTGAATGTGAGAGAGCCTTTACTCAATTAGAGAACACGGTGTTCTATAGACATGTAAGGCCTAAATTCTTTTGGAAGATTCAAAAATGGCTTCAAATTGGTGAAGAGAAAAAGTTTACAGAGAATGTGAAAATTATTGATCAAATGTTGTATTCAAAAATCAAATCCAAAAAAGATCAAATGCAAGGAGAGCAACAATTTGATTTGCTAAGTATCCTTTTGAAACAAAGTATAGGAGATGGAAAAAATCCAATAGATGATGAAAATAAGTTTCTAAGAGACACATCATTTAATCTACTTGCTGCTGGAAGAGACACTATTAGTTCTGCTCTTACTTGGTTTTTCTGGTTGGTGGCAACACACCCTTTTGTTGAAGCTAAAATTCTTGAAGAGATCAAAGAAAATTTACCATCAAGAAAGGATAATTGGAAATATTTAGGAGTGGAAAGACTTAACAATTTAATTTATTTACATGCAGTTTTATGTGAAGTCTTAAGGCTTTATCCACCAGTGCCTTTTGAGCATAAATCATCATTGAAATCTGATGTTCTTCCTAGTGGACATATGGTTGAATCAAATTCAAGGATAGTGTATTCTCTATACTCAATTGGTAGAATGGAGAAGATTTGGGGAGAAGATTGCTTGGAATTTAAGCCAGAGAGGTGGATTTCTAAGAAAGGAGGGATAATTCATGTACCCTCTTATAAGTTCATTGCTTTTAATGCTGGACCAAGGACTTGTTTGGGTAAGGATATAAGCTTTATTGAGATGAAAATGATTGCTGCATCAATATTGTTGAATTATCAAATTCAAGTGGTGGAAGATAATCCCATAATTCCAAGTATTTCTGTTGTCCTACACATGAAACATGGTTTGAAGGTTAATGTGAAAAAAAGAAGCATTTGA 1503 0.3313 MDVFGIGEIILAVSVFIAIHYWRLNRNTPITIWPIMGMLPSFIHNLSNFPDYINSLLQQNGGTFIFEGPWLTSMKCVMTSDSMNVQHITSTKFENYVKGNDFEEIFEVLGDGIFRSDFHIWKYNRTLLHSIFKQENFQVFLHKTIEKKIFSCLLVFLDNACKKRLQVDLQDIFQRLTFDNICCIVLGFDPICLSIDLPEIECERAFTQLENTVFYRHVRPKFFWKIQKWLQIGEEKKFTENVKIIDQMLYSKIKSKKDQMQGEQQFDLLSILLKQSIGDGKNPIDDENKFLRDTSFNLLAAGRDTISSALTWFFWLVATHPFVEAKILEEIKENLPSRKDNWKYLGVERLNNLIYLHAVLCEVLRLYPPVPFEHKSSLKSDVLPSGHMVESNSRIVYSLYSIGRMEKIWGEDCLEFKPERWISKKGGIIHVPSYKFIAFNAGPRTCLGKDISFIEMKMIAASILLNYQIQVVEDNPIIPSISVVLHMKHGLKVNVKKRSI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00831 500 SUPERFAMILY Cytochrome P450 32 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00831 500 CDD CYP86A 64 491 - -
Trre13g00831 500 Gene3D Cytochrome P450 28 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00831 500 PANTHER CYTOCHROME P450 23 493 - -
Trre13g00831 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Trre13g00831 500 Pfam Cytochrome P450 31 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00831 500 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00831 500 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00831 500 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00831 500 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00831 500 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00831 500 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00831 500 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00831 500 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00831 500 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00831 Trre-Chr13 6648138 6649640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00831 30 499 Cytochrome P450 AT2G23180 45.851 1.11e-156 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00831 - - tpra:123890719 787.334