Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00803 ATGCCAAGTGTGGCTGTAAAACTCTACAGCGTATTCTTCAAGTTCCTCTTGAAGCACCGTTTACAAAACCGTATTCAATCTCAACCCGATTTAAATAACTCTAACTCTTTTGGTATCACTTCACGACCCGAAGAAACCGTCGCTAATTCTAACCCTTCTTTTACCGACGGTGTCGCTACCAAAGACATTCACATCGATCCTTTCACTTCTCTTTCAATTCGAATTTTTCTTCCTCAATCTGCACTTTCACCACCCGAACCTAATTCCAAACCTAAAAAGCAAGATCCCGAACCTGGATCTGCTACTTCGCGCCGTAATAGTTATGGTCCACCGTATAAGGAAGATGAGTTCCGAGGGAATTTGTTTGGTGCTGCCGGTAGTAATGGTGTTGAGAGTTTGAATTTGATGGGAGCTGGTGTTAATGGTGGTGCTGGATTATATAGAGGCTATTCCCCGCCGGTGTTGGATAATCGACGGAGAAAATTGCCGGTGATGTTGCAGTTTCATGGTGGTGGTTGGGTTAGTGGGAGTAATGATTCTGTTGCGAATGATTTGTTTTGTAGACGAATTTCGAAGCTTTGTGATGTGATTGTTATTGCTGTTGGGTATAGGTTGGCGCCGGAGAGTCGGTATCCGGCTGCTTTTGAGGATGGATTGAAGGTTTTGAATTGGTTGGCGAAACAAGCGAATTTGGCTGAGTGTAGTAAGTCTATGGGGGTTGGAGGAGGTGGTAGCCATGGTGGTGGTGGTGGTGGTGAGTTTAATAAATCAGATGGTCATAGACATATTGTTGAATCGTTTGGAGTTTCGGTTGTTGAGCCTTGGTTGGCTAGTCATGGAGATCCATCAAGATGTGTTCTTCTTGGAGTGAGTTGTGGTGCGAATATTGCAGACTATGTGGCTCGAAAATGTGTGGAAGGAGGCAAGCTTTACGACCCTGTCAAGGTGGTAGCACAGGTCTTGATGTACCCATTTTTTGTTGGAAGTGTTCCCACACATTCTGAAATAAAATTGGCAAACTCCTACTTCTATGATAAGGCTATGTGCATACTTGCATGGAAGCTTTTCTTACCCGAGGAAGAATTTAGCTTGGATCATCCGGCTGCTAATCCCCTTATCTCAGGCCGGTCTCCCCCTTTAAAGATGATGCCTCCAACATTGACAGTGGTGGCAGAGCATGACTGGATGAGGGATCGTGCCATTGCTTACTCAGAGGAGCTCCGAAGGGTAAATGTCGATGCACCTGTTCTCGAGTATAAGGATGCAGTACATGAATTTGCGACACTTGATGTACTAATCAAAAGCCCCCAGGCCCAGGTTTGTGCTGAGGATATTGCCATCTGGGTCAAGAAATATATTTCACTTCGAGGTCACGAATTCTCGTATTGA 1389 0.45 MPSVAVKLYSVFFKFLLKHRLQNRIQSQPDLNNSNSFGITSRPEETVANSNPSFTDGVATKDIHIDPFTSLSIRIFLPQSALSPPEPNSKPKKQDPEPGSATSRRNSYGPPYKEDEFRGNLFGAAGSNGVESLNLMGAGVNGGAGLYRGYSPPVLDNRRRKLPVMLQFHGGGWVSGSNDSVANDLFCRRISKLCDVIVIAVGYRLAPESRYPAAFEDGLKVLNWLAKQANLAECSKSMGVGGGGSHGGGGGGEFNKSDGHRHIVESFGVSVVEPWLASHGDPSRCVLLGVSCGANIADYVARKCVEGGKLYDPVKVVAQVLMYPFFVGSVPTHSEIKLANSYFYDKAMCILAWKLFLPEEEFSLDHPAANPLISGRSPPLKMMPPTLTVVAEHDWMRDRAIAYSEELRRVNVDAPVLEYKDAVHEFATLDVLIKSPQAQVCAEDIAIWVKKYISLRGHEFSY 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00803 462 PANTHER ARYLACETAMIDE DEACETYLASE 42 427 - -
Trre13g00803 462 SUPERFAMILY alpha/beta-Hydrolases 148 453 IPR029058 -
Trre13g00803 462 Gene3D alpha/beta hydrolase 18 456 IPR029058 -
Trre13g00803 462 MobiDBLite consensus disorder prediction 28 55 - -
Trre13g00803 462 MobiDBLite consensus disorder prediction 80 113 - -
Trre13g00803 462 Pfam alpha/beta hydrolase fold 165 427 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00803 Trre-Chr13 6162720 6166970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00803 1 462 Carbohydrate Esterase AT3G27320 71.429 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00803 - - pper:18781636 723.005