Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00749 ATGGTTGATCTTTTGTTCATCGTTTTAACTTTCATTTCAATCTTTGCAATTGCTTATGTTGTTAAATATCTTAACAACAAAGGTTCCTCACACAAAGCACCTCATGGAAGTATGGGGTGGCCATTCCTTGGAGAGACTCTTGATTTCCTCAAGCCTCATAAATCAAACTCTTTAGGAAGCTTCTTACAAGAACGTTGTTCTAGGTATGGAAGAGTTTTCAAGTCCAATCTGTTTGGCTCTCCCACCATAGTTTCATGTGACTTTGAGCTCAACATGTTTATTCTTCAAAATGAAAGGAAACTATTCCCTGTTGATTACCCTAAAGTAATGCACAAGATCTTAGGGAAATTCTCTCTGCTTCTAGTCAAAGGAGATCTTCACAAGAAGCTAAGAAGCACAGTTATCAGTTTTGTTAGTGCATCAAAATGTGAATCCAACTTCATTAACTCTGTGGAAATGCTTGTACTCTCAAGGGTTAACTCATGGGGTTCAAAGTCTACACAAGTTGCATTCTACAAAGAAGCTAAAAGGTTTTCCATCAATGTTATGCTGAAGCACCTTCTGAATATCAATCCTGATGAGCCCATAGCCTCAAAGATTTTGGAGAACTTTGAAAAATATATAAAGGGTTTCATTTCATTGCCATTATATATTCCAGGGACTACATACTTCAAAGCTGTGAAGGCTAGAATAAGACTCTCATCTATTATCAAAGATATTATCATAGAGAGGCGTAGTAAAGTTGATAATGTGAAGACTGTTGAAGGTGGGGACCTCTTGAATTTGATTTTATCAAAACAGAATTTAAGTGATGAAGAGAGAGTTAGCATTGTTTTGGACCTTTTGTTTGGAGGATATGAGACAACCTCAAAACTTCTCTCTATGATTGTCTATTTTCTTGATGGAGCACCTAATGCTTTGGAAAGATTAAAGGAAGAGCATCAAGTGATAAGGAAAAGTAAAATGGATGGAGAGCTATTGAATTGGGAAGACTATAAGCAAATGGAGTTCACTCAAAATGTGATTTATGAAGCTATGAGATGTGGGAATGTTGTCAAATATCTTCATAGGAAAGCTGTTCAAGATATCAAATTTAAAGGGATTGTAATACCTGCAGGATGGAAGGTTCTTCCAGTCTTGTCAGCACCACATTTGGATCCCAACTGTTTTGAGAATCCTTTGGAGTTCAATCCCTTTCGGTGGAATGACAATTCAACAAGCCAGAAAGTTGCACCATTTGGTGGTGGTCCACGTCTATGTCCTGGTGCTGATCTAGCTAAAGTGGAGATAGCATTCTTCCTTCATCATCTTGTCCTTAATTATAGGTGGAAAATGAAGGCAAACGACCACCCAATTGCTTTCCCTTACGTGGAATTCACAGGAGGGCTGTTATTGGATCTTAAAAATTATCGACAATCAATAAAGTAA 1428 0.3739 MVDLLFIVLTFISIFAIAYVVKYLNNKGSSHKAPHGSMGWPFLGETLDFLKPHKSNSLGSFLQERCSRYGRVFKSNLFGSPTIVSCDFELNMFILQNERKLFPVDYPKVMHKILGKFSLLLVKGDLHKKLRSTVISFVSASKCESNFINSVEMLVLSRVNSWGSKSTQVAFYKEAKRFSINVMLKHLLNINPDEPIASKILENFEKYIKGFISLPLYIPGTTYFKAVKARIRLSSIIKDIIIERRSKVDNVKTVEGGDLLNLILSKQNLSDEERVSIVLDLLFGGYETTSKLLSMIVYFLDGAPNALERLKEEHQVIRKSKMDGELLNWEDYKQMEFTQNVIYEAMRCGNVVKYLHRKAVQDIKFKGIVIPAGWKVLPVLSAPHLDPNCFENPLEFNPFRWNDNSTSQKVAPFGGGPRLCPGADLAKVEIAFFLHHLVLNYRWKMKANDHPIAFPYVEFTGGLLLDLKNYRQSIK 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00749 475 CDD CYP90-like 65 467 - -
Trre13g00749 475 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00749 475 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00749 475 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00749 475 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00749 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Trre13g00749 475 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00749 475 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00749 475 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00749 475 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00749 475 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00749 475 Pfam Cytochrome P450 34 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00749 475 Gene3D Cytochrome P450 24 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00749 475 PANTHER CYTOCHROME P450 26 31 445 - -
Trre13g00749 475 FunFam Cytochrome P450 724B1 28 468 - -
Trre13g00749 475 SUPERFAMILY Cytochrome P450 31 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00749 Trre-Chr13 5764464 5768850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00749 38 367 Cytochrome P450 AT5G14400 54.985 5.39e-131 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00749 K12639 - gmx:100791737 739.569