Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00748 ATGGTTGATCTTTTGTTCATCGTTTTAACTTTCATTTCAATCTTTGCAATTGCTTATGTTGTTAAATATCTTAACAACAAAGGTTCCTCACACAAAGCACCTCATGGAAGTATGGGGTGGCCATTCCTTGGAGAGACTCTTGATTTCCTCAAGCCTCATAAATCAAACTCTTTAGGAAGCTTCTTACAAGAACGTTGTTCTAGGTATGGAAGAGTTTTCAAGTCCAATCTGTTTGGCTCTCCCACCATAGTTTCATGTGACTTTGAGCTCAACATGTTTATTCTTCAAAATGAAAGGAAACTATTCCCTGTTGATTACCCTAAAGTAATGCACAAGATCTTAGGGAAATTCTCTCTGCTTCTAGTCAAAGGAGATCTTCACAAGAAGCTAAGAAGCACAGTTATCAGTTTTGTTAGTGCATCAAAATGTGAATCCAACTTCATTAACTCTGTGGAAATGCTTGTACTCTCAAGGGTTAACTCATGGGGTTCAAAGTCTACACAAGTTGCATTCTACAAAGAAGCTAAAAGGTTTTCCATCAATGTTATGCTGAAGCACCTTCTGAATATCAATCCTGATGAGCCCATAGCCTCAAAGATTTTGGAGAACTTTGAAAAATATATAAAGGGTTTCATTTCATTGCCATTATATATTCCAGGGACTACATACTTCAAAGCTGTGAAGGCTAGAATAAGACTCTCATCTATTATCAAAGATATTATCATAGAGAGGCGTAGTAAAGTTGATAATGTGAAGACTGTTGAAGGTGGGGACCTCTTGAATTTGATTTTATCAAAACAGAATTTAAGTGATGAAGAGAGAGTTAGCATTGTTTTGGACCTTTTGTTTGGAGGATATGAGACAACCTCAAAACTTCTCTCTATGATTGTCTATTTTCTTGATGGAGCACCTAATGCTTTGGAAAGATTAAAGGAAGAGCATCAAGTGATAAGGAAAAGTAAAATGGATGGAGAGCTATTGAATTGGGAAGACTATAAGCAAATGGAGTTCACTCAAAATGTGATTTATGAAGCTATGAGATGTGGGAATGTTGTCAAATATCTTCATAGGAAAGCTGTTCAAGATATCAAATTTAAAGGGATTGTAATACCTGCAGGATGGAAGGTTCTTCCAGTCTTGTCAGCACCACATTTGGATCCCAACTGTTTTGAGAATCCTTTGGAGTTCAATCCCTTTCGGTGGAATGAGGACAATTCAACAAGCCAGAAAGTTGCACCATTTGGTGGTGGTCCACGTCTATGTCCTGGTGCTGATCTAGCTAAAGTGGAGATAGCATTCTTCCTTCATCATCTTGTCCTTAATTATAGGTGGAAAATGAAGGCAAACGACCACCCAATTGCTTTCCCTTACGTGGAATTCACAGGAGGGCTGTTATTGGATCTTAAAAATTATCGACAATCAATAAAGTAA 1431 0.3746 MVDLLFIVLTFISIFAIAYVVKYLNNKGSSHKAPHGSMGWPFLGETLDFLKPHKSNSLGSFLQERCSRYGRVFKSNLFGSPTIVSCDFELNMFILQNERKLFPVDYPKVMHKILGKFSLLLVKGDLHKKLRSTVISFVSASKCESNFINSVEMLVLSRVNSWGSKSTQVAFYKEAKRFSINVMLKHLLNINPDEPIASKILENFEKYIKGFISLPLYIPGTTYFKAVKARIRLSSIIKDIIIERRSKVDNVKTVEGGDLLNLILSKQNLSDEERVSIVLDLLFGGYETTSKLLSMIVYFLDGAPNALERLKEEHQVIRKSKMDGELLNWEDYKQMEFTQNVIYEAMRCGNVVKYLHRKAVQDIKFKGIVIPAGWKVLPVLSAPHLDPNCFENPLEFNPFRWNEDNSTSQKVAPFGGGPRLCPGADLAKVEIAFFLHHLVLNYRWKMKANDHPIAFPYVEFTGGLLLDLKNYRQSIK 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00748 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Trre13g00748 476 Gene3D Cytochrome P450 24 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00748 476 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00748 476 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00748 476 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00748 476 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00748 476 FunFam Cytochrome P450 724B1 28 469 - -
Trre13g00748 476 CDD CYP90-like 65 468 - -
Trre13g00748 476 SUPERFAMILY Cytochrome P450 31 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00748 476 Pfam Cytochrome P450 34 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00748 476 PANTHER CYTOCHROME P450 26 31 446 - -
Trre13g00748 476 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00748 476 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00748 476 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00748 476 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00748 476 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00748 Trre-Chr13 5764464 5768850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00748 38 367 Cytochrome P450 AT5G14400 54.985 5.28e-131 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00748 K12639 - gmx:100791737 734.947