Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00738 ATGAGTCAGCAGAAAATTAAGCGCAGAGTCGGTGTATATGAGGTTGGAAGGACCATTGCTGAGGGAACATTTGCAAAGGTGAAATTTGCAAGGAACTCTGAGAGAAATGAACCTGTGGCTCTCAAAATTCTTGACAAAGAGAAAGTTCTAAAGCACAAGATGGCCGAGCAGCGGGAAATTGCTAAGATGAAGTTAATCAAGCATCCAAATGTTGTTCGACTATATGAGGTCATGGGAAGCAGGACAAAAATATATATTGTTTTGGAGTTTGTGACTGGCGGGGAGCTTTTCGACAAAATTGTAAACCATGGACAAATGAGTGAACATGAAGCACGTAGGTATTTCCAGCAGCTTATAAATGTTGTTGATTATTGTCATAGCCGGGGTGTTTATCACCGAGATCTAAGAAAATTTGCTATTATATAG 426 0.3991 MSQQKIKRRVGVYEVGRTIAEGTFAKVKFARNSERNEPVALKILDKEKVLKHKMAEQREIAKMKLIKHPNVVRLYEVMGSRTKIYIVLEFVTGGELFDKIVNHGQMSEHEARRYFQQLINVVDYCHSRGVYHRDLRKFAII 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00738 141 FunFam Non-specific serine/threonine protein kinase 4 90 - -
Trre13g00738 141 Gene3D Phosphorylase Kinase; domain 1 6 97 - -
Trre13g00738 141 SUPERFAMILY Protein kinase-like (PK-like) 11 136 IPR011009 -
Trre13g00738 141 Gene3D Transferase(Phosphotransferase) domain 1 98 138 - -
Trre13g00738 141 ProSiteProfiles Protein kinase domain profile. 13 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g00738 141 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 136 - -
Trre13g00738 141 SMART serkin_6 13 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g00738 141 Pfam Protein kinase domain 13 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00738 Trre-Chr13 5678360 5679639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00738 3 136 CBL-interacting serine-threonine protein kinases AT2G26980 83.088 4.96e-77 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trre13g00738 Pkinase 7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00738 - - gmx:100794566 245.743