Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00717 ATGGCTTCCACAACACCCACCACACCAAAAACTGTCACTAAAGAGATACTTACCGACATGGGGCCATTCATCCGTATCTTTAGTGACGGTTCAATAGAAAGACCATTACAATCACCATTTGTTCCACCAAATCTCAATGACCCAAATCATTCATCAAAAGATATAGTAATCCCACATAACCCCACAATTTCATCTAGAATTTACCTTCCAAAAATCACAAACCCATCTTCCAAATTACCAATCTTGATCTATTTTCATGGCGGCGCTTTCCTCTTCGAATCCACATTCTCTCAATTGTACCATGAACATTTGAAAAAACTTGCATCACAAGCAAATGTTATAGTTGTTTCAATTGAGTATAGACTTGCTCCTGAGTATCCTCTCCCAACATGTTACCATGATTGTTGGGCTGCAATCCAATGGGTATCTTCTCATTCCAATAATACCCTCAACAATGCTGAGCCATGGTTGATTGAACATGGTGATTTTGATAAAATTTTCATTGGTGGTGATAGTGCTGGTGCTAACATTGCTCATAACATGGCAATTCAAGCTGGAACTGAATTGTTACCTTTTGATGTTAAAATATTAGGAGCTATTTTAATTCATCCTTATTTTCAAAGCTCTTATCCAATAGGGTCAGAACCTATTGTAGAGGCTGAAAATAATATTGGTCATAAGGTTTGGGATTTGGTGTACCCAAATGCACCTTTTGGAATTGATAATCCTTTTGTTAATCCTTTGGGTGAAGGTGCACCTAACTTGGAAAAACTTGGTTGTTCTAAAATTATTGTTTTTGTTGCTGGAAAAGATAGCTTAAGGGATAGAGGTGTTTGGTATTTTGAAAGTGTGAAGAAAAGTGGGTGGAATGGAAAATTGGAATTGTTTGAAGAAAAAGATGAGAATCATGTTTATCATTTGCTCAAACCAGAATCTGAGAGTGCCAAAATATTTCTTGAGAGATTGGTAAGTTTTGTTAAGGAGACAACAAATTAG 996 0.3645 MASTTPTTPKTVTKEILTDMGPFIRIFSDGSIERPLQSPFVPPNLNDPNHSSKDIVIPHNPTISSRIYLPKITNPSSKLPILIYFHGGAFLFESTFSQLYHEHLKKLASQANVIVVSIEYRLAPEYPLPTCYHDCWAAIQWVSSHSNNTLNNAEPWLIEHGDFDKIFIGGDSAGANIAHNMAIQAGTELLPFDVKILGAILIHPYFQSSYPIGSEPIVEAENNIGHKVWDLVYPNAPFGIDNPFVNPLGEGAPNLEKLGCSKIIVFVAGKDSLRDRGVWYFESVKKSGWNGKLELFEEKDENHVYHLLKPESESAKIFLERLVSFVKETTN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00717 331 Gene3D alpha/beta hydrolase 11 328 IPR029058 -
Trre13g00717 331 PANTHER ARYLACETAMIDE DEACETYLASE 22 312 - -
Trre13g00717 331 SUPERFAMILY alpha/beta-Hydrolases 41 329 IPR029058 -
Trre13g00717 331 Pfam alpha/beta hydrolase fold 82 306 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00717 Trre-Chr13 5503128 5504123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00717 15 330 Carbohydrate Esterase AT1G19190 44.860 3.38e-86 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00717 - K13258 aprc:113873855 437.573