Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00687 ATGAACTCTAATCCCACTCCTCTGTGTAAGGGGAAGCAGTTGAAGAGAGTGCAAAATAGGCAAAATCGTTCTTCATTTATGTGGTGGACAACTAGGATGCTGAATTTTATGTCAAGGTCAGTGATGTCTATCTCAATCTTGTACACACCAGCAATTGATATATGGAGCATTGAATGCATTTTTGCAGAAGTGCTGACAGGAAAGCCATTGTTTCCTGGTGAAAGCATTGTGCATCAATTAGATTTGATTACCGATTTTCTTGGAACACCACCACCCGAAATTATCTCAGGAGTTCGAAAGGAGAAGGCAAGGAAGCACCTGATGGAGATGCAGAAGAAACTTCCTCTGCCATTTGAACGGAAATTTTCGTCTATTGCAAAGACTTCTAGCATTTGA 396 0.4091 MNSNPTPLCKGKQLKRVQNRQNRSSFMWWTTRMLNFMSRSVMSISILYTPAIDIWSIECIFAEVLTGKPLFPGESIVHQLDLITDFLGTPPPEIISGVRKEKARKHLMEMQKKLPLPFERKFSSIAKTSSI 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00687 131 Gene3D Transferase(Phosphotransferase) domain 1 41 127 - -
Trre13g00687 131 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 46 120 - -
Trre13g00687 131 SUPERFAMILY Protein kinase-like (PK-like) 42 120 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00687 Trre-Chr13 5306791 5309425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00687 48 122 MAP Kinase Gene Family AT1G18150 72.000 3.33e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00687 - - gmx:100800878 135.191