Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00661 ATGGGTGCATTCATCACTTTCCTTCTTTCCTTTCAACCACTCTCAATCATCTTCTTCATCCTCTTCTACATAACACTAATCGAATTTCGACGTGTTAAAAAATTTGTTGGAACCGGTCCAACAACCTATCCTGTAATAGGTTGTTTGATATCCTTCTACAAAAACCGTTTTCGGTTGCTAAGTTGGTACACAGAACTTCTAGCCAAATCGCCAACCAATACCATATTGGTTCAACGATTAGGTGCACGTAGAACCATTATAACTACAAATCAACAAAACGTTGAGTACATACTCAAGACCAATTTTAAGAACTTCCCCAAAGGGAAGCCTTTCACAGAAATTCTTGGTGATTTCCTCGGTAAAGGTATATTCAACGTGGACGGAGAATTATGGCTAAAACAGCGAAAACTGGCAAGTCACGAGTTTTCGCTAAGATCCATAAATGAGTTCATCATGAACACATTGGAGGAAGAAGTGAATGGAAAGCTATTGCCATTCATGGATTCACTATCAATAGAGAACAAAGTGGTTGACTTTCAAGAGTTGTTGGGAAGATTCTCTTTCAACGTGATTTGCAAATTCACCTTAGGGATTAATGATGACAATGATACCAATAGGTGTTGTTTGGATCCTTGTTTTCCAATTTCGCCGTTGGCTAGGGCTTTCGATGTGGCGGCCGAGATTTCAGCTAGGCGTGGAGCAGCGCCTTTGTTTTTGGTGTGGAGAGTTAAGAAGTGGCTCAGAGTTGGATCGGAAAATAGGCTTAGAGAGGTGGTTAACGATGTTAAGACACGTGTCATGGAAATTATTTTGGAGAGGAAGAAGAAGATGAATGTAATAGGAGAGAAGCTTGATGGTGATCAAGATCTCTTGTCACGTCTTATTTCTTCAGGTCATGATGAGGAAGTAATTAGGGACATGATGATAAGTTTCATTATGGCAGGGAGGGACACAACATCATCAGCAATGACATGGTTCTTTTGGTTACTATCACATTATTCTAATATTGAGCACAAAATATTGAAAGAAGCAAATTGTGAGTCATTGGATTATGAATCATTGAAGAATATGAATTTTTTAAAAGCATGTTTATGTGAATCAATGAGATTATATCCACCAGTAGCATGGGATTCAAAGCATGCCACGTGTGATGATGTATTGCCAGATGGCACTTTGGTTAAAAGTGGAGATAGAGTGACTTATTTTCCTTATGGAATGGGAAGAATGGAAAATATATGGGGAAAAGATTGGTTTGAATTTAAACCGGATCGGTGGCTCGTCGAAACGGTTGAACCGATTGAACCAGAAAATAATGAACTTATTGAAAGAAGTTTGTCCTTTTAA 1344 0.3862 MGAFITFLLSFQPLSIIFFILFYITLIEFRRVKKFVGTGPTTYPVIGCLISFYKNRFRLLSWYTELLAKSPTNTILVQRLGARRTIITTNQQNVEYILKTNFKNFPKGKPFTEILGDFLGKGIFNVDGELWLKQRKLASHEFSLRSINEFIMNTLEEEVNGKLLPFMDSLSIENKVVDFQELLGRFSFNVICKFTLGINDDNDTNRCCLDPCFPISPLARAFDVAAEISARRGAAPLFLVWRVKKWLRVGSENRLREVVNDVKTRVMEIILERKKKMNVIGEKLDGDQDLLSRLISSGHDEEVIRDMMISFIMAGRDTTSSAMTWFFWLLSHYSNIEHKILKEANCESLDYESLKNMNFLKACLCESMRLYPPVAWDSKHATCDDVLPDGTLVKSGDRVTYFPYGMGRMENIWGKDWFEFKPDRWLVETVEPIEPENNELIERSLSF 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00661 447 Gene3D Cytochrome P450 32 446 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00661 447 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00661 447 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00661 447 PANTHER CYTOCHROME P450 27 429 - -
Trre13g00661 447 Pfam Cytochrome P450 39 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00661 447 SUPERFAMILY Cytochrome P450 39 431 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00661 Trre-Chr13 5175205 5177857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00661 5 425 Cytochrome P450 AT3G48520 56.132 6.00e-165 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00661 K20665 - gmx:100786130 617.461