Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00644 ATGGGTTCCTTAAAAGAGAAACTAAAAACACTATACAAAAGTAGATGGTTTGTTTTTGTTGGAGCAATGTGGTTACAATCATGGGCTGGTATTGGTTATTTATTTGGAAGTATATCACCAGTTATAAAAAGATCATTAAATTATAACCAAAAACAACTTGCTATGTTAGGTGTTGCTAAAGACCTTGGTGATTGTGTTGGTTTTGTTACTGGTGTTTTATGTGAGATTTTACCTATTTGGGCTGCTTTACTTATTGGTGCTTCTTTGAATCTTGTTGGTTATGGTTGGGTTTGGTTAATTGTTACAAGTAAAGTTCCTACTCTTCCTTTATGGGCTATGTGTATTCTTATATTCGTCGGAACAAATGGTGAAACCTACTTCAACACAGTTTCATTGGTATCTTGTGTGCAAAATTTCCCGAAAAGCCGTGGTCCCGTCGTTGGAATTCTAAAGGGCTTCGCTGGATTGAGTGGTGCAATATTGACACAAATATATGCACTCATCCATTCCCCTGATCACGCATCATTGATATTTATGGTTGCGGTTGGTCCATCATTGGTAGCAATAGGTCTTATGTTCATTGTTAGACCTGTCGGAGGTCACAAACAAGTTCGGCCTTCGGACGGAAAATCGTTCACATTTGTTTATGGTGTATGCCTCCTTTTGGCGGCTTATTTGTTGGGAGTTATGGTTGTTCAAGATTTAGTTGATCTGAGTGAAACTGTTATCTCAATTTTTACGATTATCCTCTTTCTGATCCTCCTTGTTCCAATTGTAATTCCTTTGTCGTTGACTTTCGGACCTGTCGAAAAGCCTCTAGAGGAAGAAGCACTCCTTCTAGAACCACAAGAACAATTGCAACATGATTCTGATGAAGTAATATTGAGTGAGTTGGAAGATGAGAAGCCTAAGGAAGTGGACTTGCTTCCGGCATTGGAAAGACAGAAACGTATAGCACAATTACAATCGAGATTACTACAAGCTGCTGCAGAAGGAGCTGTTAGGGTTAAGAGAAGAAGAGGACCACACAGAGGAGAAGATTTTACCTTGATGCAAGCTTTGATTAAAGCCGATTTTTGGCTTCTTTTCATTTCCATGGTTTTAGGTTCTGGATCCGGGTTGACTGTAATTGACAATCTCGGTCAAATGAGCCAGTCTTTAGGATATGACAATGCGCATATATTCGTATCCATGATCAGTATTTGGAACTTTCTTGGACGTGTCGGAGGAGGCTACATATCTGAGCTTGTTGTCAAGGATCATACATATCCAAGACCAGCTGCATTAGCGGTATTTCAACTAATTATGACTATTGGTCATCTTTCCATCGGTATGGGATGGCCAGGTTCAATGTACATCGGCACTTTACTAGTTGGACTTGGTTATGGTGCTCATTGGGCAGTTGTTCCAGCTACAGCCTCCGAATTATTCGGTTTAAGAAACTTCGGTGCATTATACAATTTCATCACACTAGCAAACCCTATTGGAACTCTTGTCTTCTCTAGTCTCATTGCTAGCCGAATCTATGATCATGAAGCGGAGAAACAAGCTCATGGCGGCCAACACCTTAATATAGGATCATTTGTATCTCACACGCTTAATGTTAGTGAGCCGCTAAAGTGTGAAGGTTCCATATGCTTCTTCCTGACTTCATCTATCATGGCAGGATTCTGCATTGTTGCAGCAGGTTTAAGCATGTTTCTCGTCTTCCGAACAAGGATTGTTTATGCACATTTATATGGAAAGTCTTCTATGAGAAACCTTCGATGA 1770 0.4006 MGSLKEKLKTLYKSRWFVFVGAMWLQSWAGIGYLFGSISPVIKRSLNYNQKQLAMLGVAKDLGDCVGFVTGVLCEILPIWAALLIGASLNLVGYGWVWLIVTSKVPTLPLWAMCILIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYALIHSPDHASLIFMVAVGPSLVAIGLMFIVRPVGGHKQVRPSDGKSFTFVYGVCLLLAAYLLGVMVVQDLVDLSETVISIFTIILFLILLVPIVIPLSLTFGPVEKPLEEEALLLEPQEQLQHDSDEVILSELEDEKPKEVDLLPALERQKRIAQLQSRLLQAAAEGAVRVKRRRGPHRGEDFTLMQALIKADFWLLFISMVLGSGSGLTVIDNLGQMSQSLGYDNAHIFVSMISIWNFLGRVGGGYISELVVKDHTYPRPAALAVFQLIMTIGHLSIGMGWPGSMYIGTLLVGLGYGAHWAVVPATASELFGLRNFGALYNFITLANPIGTLVFSSLIASRIYDHEAEKQAHGGQHLNIGSFVSHTLNVSEPLKCEGSICFFLTSSIMAGFCIVAAGLSMFLVFRTRIVYAHLYGKSSMRNLR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00644 589 CDD MFS_Mch1p_like 14 562 - -
Trre13g00644 589 Gene3D MFS general substrate transporter like domains 313 530 IPR036259 -
Trre13g00644 589 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 577 - -
Trre13g00644 589 Pfam Nodulin-like 15 262 IPR010658 -
Trre13g00644 589 SUPERFAMILY MFS general substrate transporter 212 573 IPR036259 -
Trre13g00644 589 SUPERFAMILY MFS general substrate transporter 5 201 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00644 Trre-Chr13 5057895 5062017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00644 3 583 Nodulin-like Gene Family AT5G14120 68.761 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00644 - - aprc:113861924 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00644 13 5057895 5062017 Trre13g00644 13 5057895 5062017 ECH