Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00617 ATGAAATTCAGCTACAGTTCAAATCTGTTCTCTGTTTGGTTCATTCTGTTTTTGTATTTCTTACATGCTACTATTGCCATAGACAAAATTACATCATCATCATCATCATCTCAATTCATGAAGGACCATGAAACTCTAATCTCCAAAGATGGTAACTTTACATTTGGATTCTTTACCCCAATAAATTCTACGAACCGCTACGTCGGAATTTGGTGGAAGTCTGAATTCACAAACATATGGGTGGCTAACAGAAACCATCCACTGAAAGATTCTAATGGTACTGTCACAATATCTAATGATGGAAATCTTGTGGTATTGAATGGAGAAAAACAAGTCATTTGGTCATCAAATGTTTCCAACATAGCATCTTCTAATAGTACTGTCGAGTTTTCGGAGTTCGGTAACCTTGTTCTTTTGGATAGCACAAGTGGAAAGATGTTATGGCAGAGTATTCAGCAACCATCAAATACATTACTGCCTGGTACGAAACTTTCTATCGACAAAAGAACAGGTGAGAAAATCAGACTAAGATCATGGAAAAGTCCTTCTGATCCATCTTTTGGGAGTTTTTCTACTAGTATTGTTGAACGGAGAAATATACTCGAAATTTTTATTTGGAATGAAACTCGAACGTATTGGCGTAGTGGACCTTGGAATGGTGGAGTTTTTACAGGAATATCAAGTAGGACAGATGAACATTTTTATGGTTTTCAAGGTGGAAATGATGGAGGAGGGAATTTAAATCTATATTATACGATCCCAAATGGCGTGGCATTTGTGATCTATGTCCTGAATTCACAAGGAGAAATAGAATCGACATTGTGGGACGATGTGAAGAAAGAAGTGAAAGTTACATGGGCTAATCGAGAATCGGAGTGTGACAGTTACGGTATATGTGGGATATTTGCAAGTTGTAGCTCACTGAGTTCGCCGATTTGCACCTGTTTGAAAGAATTTGAACCTAAGACTATTCAAGAATGGAATAGAAACAATTGGACCGGCGGTTGTGTTAGGAAGACACCTTTGCAGTGTGAAAGGATCGACAATACAAAGGATGAAGACGACGTGTTTTTGAAATTGCAGATGGTTAAAATTCCTGATTTTGCAGAAGGTGTAGCTGTTACACCAGATATATGCAGAAGCTTATGCTTGCATAATTGCTCTTGCGTCGCGTATGCTCATGATGCTGGGATTGGTTGTATGTCTTGGACTAGGAATCTACTCGATATACAACTACTCAAAAGTGGAGGACTCGATCTATATGTTCGTGTAGCCCGTGAAGAACCTCATAGAGGGAGAAACAAAACTATCATCATTACAATATCAGTGATAATAGGAACTCTCATAACAATCCTTTTTGCATATCTCATGTGGAGAAGGGCTTCAAAAAACTCAGAACAAAATAATAGTGACAATGTATTTGGAGAAGGAGGACTATCACAAGTTAGCTTACAGGAGCTATTATTATTTGATTTTGAAAAGCTTGCAACTGCCACAAACAACTTCCACTTGTCCAACAAACTTGGACAGGGTGGTTTTGGTCCAGTATACAAGGGGAAACTGCAAGATGGTCGAGAAATAGCGGTTAAAAGACTTTCTAGAGCATCTGGTCAAGGGATAGAAGAATTCACGAATGAAGTTGTGGTTCTTTGTAAGCTTCAACATCGTAATCTTGTAAGACTTCTTGGCTGCTGTGTTGATGGTGATGAAAAGATGTTGATGTATGAGTACATGCCAAACAAAAGTTTGGATTCATATATTTTTGATCCATCAAAAAATAAGCTTCTGGATTGGGGAACACGACATAGAATTATAGATGGAATAGCTCGAGGATTGTTGTATCTTCACAGAGATTCGAGACTAAGAATTATACATAGAGATTTGAAAGTAAGTAATATCTTGTTAGACGAGGAGTTGAATCCAAAAATATCGGACTTTGGTATGGCTAGAATCTTTGGAGGGAGAGAAGATCATGCTGATACAAATAGGGTTGTCGGAACTTATGGCTATATGTCTCCTGAATACGCAATGCAAGGACACTTTTCAGAGAAATCAGATGTTTTTAGCTTTGGTGTTTTGATACTTGAGATCATTATTGGTAGAAGAAACTCAAGCTTTAATGGCAATGAGCATGCTCTGAGTCTTTTAGGATTTGTATGGATTCAATGGAGGGAAGACAATATTTTATCTTTAATAGATCCAGAAATATATGATCATAATCATCATAAGAATATTTTGATATGCATACATGTAGGACTTTTATGTGTACAAGAATCAGCTGTAGATAGACCTACTATGGCTACAGTAATTTCTATGCTCAATAGTGAGGTTGCATCTCTTCCTCCTCCAAGTGAACCTGCATTCATCCTGAGGCAGAATATGTTGAATTCAAAGTCCCCTGAAGAAAATCAAAGCGCAATTTCCATTAATAATGCCAATATTACACACGTATGTGGTAGATAA 2463 0.3739 MKFSYSSNLFSVWFILFLYFLHATIAIDKITSSSSSSQFMKDHETLISKDGNFTFGFFTPINSTNRYVGIWWKSEFTNIWVANRNHPLKDSNGTVTISNDGNLVVLNGEKQVIWSSNVSNIASSNSTVEFSEFGNLVLLDSTSGKMLWQSIQQPSNTLLPGTKLSIDKRTGEKIRLRSWKSPSDPSFGSFSTSIVERRNILEIFIWNETRTYWRSGPWNGGVFTGISSRTDEHFYGFQGGNDGGGNLNLYYTIPNGVAFVIYVLNSQGEIESTLWDDVKKEVKVTWANRESECDSYGICGIFASCSSLSSPICTCLKEFEPKTIQEWNRNNWTGGCVRKTPLQCERIDNTKDEDDVFLKLQMVKIPDFAEGVAVTPDICRSLCLHNCSCVAYAHDAGIGCMSWTRNLLDIQLLKSGGLDLYVRVAREEPHRGRNKTIIITISVIIGTLITILFAYLMWRRASKNSEQNNSDNVFGEGGLSQVSLQELLLFDFEKLATATNNFHLSNKLGQGGFGPVYKGKLQDGREIAVKRLSRASGQGIEEFTNEVVVLCKLQHRNLVRLLGCCVDGDEKMLMYEYMPNKSLDSYIFDPSKNKLLDWGTRHRIIDGIARGLLYLHRDSRLRIIHRDLKVSNILLDEELNPKISDFGMARIFGGREDHADTNRVVGTYGYMSPEYAMQGHFSEKSDVFSFGVLILEIIIGRRNSSFNGNEHALSLLGFVWIQWREDNILSLIDPEIYDHNHHKNILICIHVGLLCVQESAVDRPTMATVISMLNSEVASLPPPSEPAFILRQNMLNSKSPEENQSAISINNANITHVCGR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00617 820 CDD PAN_AP_plant 340 425 - -
Trre13g00617 820 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 764 - -
Trre13g00617 820 Pfam PAN-like domain 352 410 IPR003609 -
Trre13g00617 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 185 IPR036426 -
Trre13g00617 820 Pfam Protein kinase domain 502 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g00617 820 SMART ntp_6 352 424 IPR003609 -
Trre13g00617 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 151 - -
Trre13g00617 820 SMART serkin_6 502 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g00617 820 PIRSF SRK 2 820 IPR024171 GO:0004674
Trre13g00617 820 SMART blect_4 37 154 IPR001480 -
Trre13g00617 820 CDD STKc_IRAK 508 774 - -
Trre13g00617 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Trre13g00617 820 ProSiteProfiles Protein kinase domain profile. 502 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g00617 820 ProSiteProfiles Bulb-type lectin domain profile. 31 151 IPR001480 -
Trre13g00617 820 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Trre13g00617 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Trre13g00617 820 Gene3D Transferase(Phosphotransferase) domain 1 578 780 - -
Trre13g00617 820 Gene3D Phosphorylase Kinase; domain 1 462 577 - -
Trre13g00617 820 ProSiteProfiles PAN/Apple domain profile. 344 425 IPR003609 -
Trre13g00617 820 Gene3D - 26 152 IPR036426 -
Trre13g00617 820 CDD B_lectin 41 150 IPR001480 -
Trre13g00617 820 Pfam D-mannose binding lectin 77 180 IPR001480 -
Trre13g00617 820 SUPERFAMILY Protein kinase-like (PK-like) 482 773 IPR011009 -
Trre13g00617 820 FunFam receptor-like serine/threonine-protein kinase SD1-8 476 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00617 Trre-Chr13 4778999 4782727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00617 422 797 Receptor kinase-like Gene Family AT4G21410 54.264 5.84e-129 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre13g00617 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00617 - - mtr:25498365 1202.96