Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00611 ATGGAACATCTACTATTAGCCTTAACTTTCTTTTTTTCATCATTCATTTGCTACATAATTTTCCGGCCAATTTTAAGCCGTCACAAAAACCTCCCTCCATCTCCTTTATTTAAGCTGCCAATCATCGGCCACATGCACATTTTAAGCCCCCTTATCCACCAATCCTTCGACGGTCTGTCGCGCAAATACGGACCATTATTCTCTATTAATTTTGGTTCCGTTCCTTGTGTCGTCGCTTCCACTCCTCACTTAGCGAAACAAATCCTTCAAACAAACGAACAAGCTTTTAATTGTCGATATGTATCAACCGCCATTAAACGTCTCACATACGATTCATCTCTAGCTTTTGCCCCCTACGGAGACTATTGGAGATTTATTAAAAAGCTTAGCATGAGCGAGCTTTTAAGCTCTCGTAATATTAACAACTTTCAACAATTACGCTTAGAAGAGATTCACGTCATCCTTAAACTTTTTGCTAATAAAGCGAAAAGTTACGAGGTTGTGAATGTGACACAAGAGTTTCTTAAATTGGCAAATAGCATTATTTCTAAAATGATGCTGGGGGAAGCCGTGGAAGCTAAGGATGTTATACGAGATGTGACCGAAATGTTTGAGTTTAATGTGTCGGATTTTATTTGGTTGCTTAAGAAACTTGATATACAAGGGCATGGAAAGAGGATAGAGGATTTGTTTTTAAGATTTGACACATTGGTGGAAAGAGTTATTTCTAAAAGAGAGGAAATGAGGAAGACCAAAGGAATTGTGGAAAATAAGAAAGGTGAGGAGGATGGCAGTGGATTTAAAGACTTTCTTGATATCTTGCTTGATTGTGTTGAGAATGAAAAATCCGAAGTAAAAATTGAAAGAGTTCACATTAAGGCATTGGTTATGGATTTCTTCGCAGCTGCAACAGACTCAACAACAATTTCAACAGAGTGGGCACTAGTAGAACTAATGAACAACCCTTCATTGCTCCAAAAAGCACGTGAAGAAATAGACAAAGTAGTAGGAAAAAATAGACTAGTAGATGAATCTGATGGTCCAAATCTTCCTTATCTCCAAGCCATAGTAATGGAAGCATATCGTCTCCACCCACCAATACCAATGGTTGCTAGAAGATGTATCAAAGATTGCAAAATTGAAAACTATATGATCCCAAAAAATAGTTTAATCTTTGTGAATAATTGGTCCATTGGAAGAAATCCAAAATATTGGGACAATCCACTGAAGTTTGATCCTGAAAGATTTCTACAAAATTCAAAAGATTCAAATATTGATGTGAGGGGACAAAATTTTCGACTTTTTCCATTTGGGTCAGGAGCAAGGATGTGCCCTGGAATTAATTTAACTATGCGATTAGTGCCAGCTTTGCTTGGAGCTATAATTCAGTGCTTTGATTTTCATGTGTTGGATTCTAATGGTGAGATTATGAAGGGTGGTGATATTACTATTGATGTGAATGAAAGGTCAGGATTGACCGCTCCTAGGGCTCATGATTTGGTTTGTGTTCCTGTTGAAAGGATTGGTTACCATGGACCTCTTGAAACCCTTGGATGTTGA 1560 0.3769 MEHLLLALTFFFSSFICYIIFRPILSRHKNLPPSPLFKLPIIGHMHILSPLIHQSFDGLSRKYGPLFSINFGSVPCVVASTPHLAKQILQTNEQAFNCRYVSTAIKRLTYDSSLAFAPYGDYWRFIKKLSMSELLSSRNINNFQQLRLEEIHVILKLFANKAKSYEVVNVTQEFLKLANSIISKMMLGEAVEAKDVIRDVTEMFEFNVSDFIWLLKKLDIQGHGKRIEDLFLRFDTLVERVISKREEMRKTKGIVENKKGEEDGSGFKDFLDILLDCVENEKSEVKIERVHIKALVMDFFAAATDSTTISTEWALVELMNNPSLLQKAREEIDKVVGKNRLVDESDGPNLPYLQAIVMEAYRLHPPIPMVARRCIKDCKIENYMIPKNSLIFVNNWSIGRNPKYWDNPLKFDPERFLQNSKDSNIDVRGQNFRLFPFGSGARMCPGINLTMRLVPALLGAIIQCFDFHVLDSNGEIMKGGDITIDVNERSGLTAPRAHDLVCVPVERIGYHGPLETLGC 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00611 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Trre13g00611 519 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00611 519 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00611 519 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00611 519 Gene3D Cytochrome P450 24 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00611 519 PANTHER STEROID 21-HYDROXYLASE-RELATED 12 497 - -
Trre13g00611 519 SUPERFAMILY Cytochrome P450 32 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00611 519 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00611 519 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00611 519 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00611 519 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00611 519 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00611 519 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00611 519 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00611 519 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00611 519 Pfam Cytochrome P450 32 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00611 Trre-Chr13 4714314 4718882 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00611 19 507 Cytochrome P450 AT5G06900 38.340 1.60e-121 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00611 K23179 - psat:127128210 756.133