Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00610 ATGCAAATCAGGGAACATCTACTATTACCCTTCACTTTCTTTCTTTCATCACTCATTTACTACATAATTTTCCGGCCAATTTTAAACCGTCGCAAAAACCTCCCTCCATCTCCTTTATTTAAACTGCCGATCATCGGCCACATGCACATGTTAGGTCCCCTTCTCCACCATTCTTTCGACCGTCTCTCTCACAAATATGGACCGCTATTCTCTCTTAACTTTGGTTCCGTTCTTTGTGTTGTCGCTTCCACTCCCCACTTTGCAAAACAAATCCTTCAAATAAACGAAGACTCTTTTAATTGTCGTAATGAATCAACCGCCATTAAACGCCTCACATATGAATCCTCTCTAGCATTTGCACCCTACGGTGAATATTGGAGATTTATTAAAAAGCTTAGCATGAACGAACTTTTAGGCTCTCGTAGTATTAACAGCTTCCAACACTTGCGCTTACAAGAGACTCACAACCTTTTTAAACGTTTCGCTAATAAAGCAAAAAGTTACGAGGTTGTGAATGTGACGCAAGAGTTTCTTAAATTGACAAACAATGTCATTTCTAAAATGATGTTGGGGGAAGCTGAGGAGGCTAGGGACGTTGTGCGTGATGTGACCGAGATTTTTGGAGAGTTTAATCCGTCGGATTTTATTTGGTTGTTTAAGAAACTTGATTTACAAGGGTTTGGAAAGAGGATAGAGGATTTGTTTATGAGGTTTGATACTTTGGTGGAAAAGATTATTTGTAAACGAGAGGAGATGAGGAAGAATAAAAAAATGGTGAAAAATAAGGTTGAAGAGGGTGCTAAATTAAGAGACTTTCTTGATGTCTTGCTTGATTGTGCTGAGGATGAAAACTCCGAAGTAAAAATTGAAAGGGTTCACATTAAGGCCTTGATTATGGATTTCTTCACAGCAGGAACAGACACAACAGCAATTTCAACAGAATGGGCATTAGTAGAACTAATGAACAACCCTTCATTGCTCCAAAAAGCTCGTGAAGAAATAGATAAAGTAGTAGGAAAAAATAGACTGGTAGATGAATCGGACGGTCCAAATCTTCCCTATCTTCAAGCCATAATGAAAGAAACATTTCGTCTCCACCCACCAATACCAATTGTTTCTAGAAGATGTATCAAAGATTGCAAAATTGAAAACTATATGATCCCAAAAAATAGTTTAATCTTTGTGAACAATTGGTCTATTGGAAGAAATCCAAATTATTGGGACAAACCATTGGAATTTAATCCAGAAAGATTTTTAGAAAATTCTAAAATTGATGTGAGGGGACAAAATTTTCAAATTTTGTCATTTGGGTCAGGAAGAAGGATGTGTCCTGGGATTACTTTAGCAATACAAGAAGTTACAGCTTTGCTTGGTGCTATAATTCAGTGCTTTGATTTTCATGTTGTGAATTCTAATGGTGAAATTATGAAGGGTGGTGACATTATTATTGATGTGAATGAAAGGAAAGGATTGACTGCTCCTAGGGTTCATGATTTGGTTTGTGTTCCTATTGAAAGGAATGGTTATCATGGACCTCTTAGAACTCTTGGATTTTGA 1557 0.3712 MQIREHLLLPFTFFLSSLIYYIIFRPILNRRKNLPPSPLFKLPIIGHMHMLGPLLHHSFDRLSHKYGPLFSLNFGSVLCVVASTPHFAKQILQINEDSFNCRNESTAIKRLTYESSLAFAPYGEYWRFIKKLSMNELLGSRSINSFQHLRLQETHNLFKRFANKAKSYEVVNVTQEFLKLTNNVISKMMLGEAEEARDVVRDVTEIFGEFNPSDFIWLFKKLDLQGFGKRIEDLFMRFDTLVEKIICKREEMRKNKKMVKNKVEEGAKLRDFLDVLLDCAEDENSEVKIERVHIKALIMDFFTAGTDTTAISTEWALVELMNNPSLLQKAREEIDKVVGKNRLVDESDGPNLPYLQAIMKETFRLHPPIPIVSRRCIKDCKIENYMIPKNSLIFVNNWSIGRNPNYWDKPLEFNPERFLENSKIDVRGQNFQILSFGSGRRMCPGITLAIQEVTALLGAIIQCFDFHVVNSNGEIMKGGDIIIDVNERKGLTAPRVHDLVCVPIERNGYHGPLRTLGF 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00610 518 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00610 518 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00610 518 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00610 518 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00610 518 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00610 518 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00610 518 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00610 518 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00610 518 Gene3D Cytochrome P450 27 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00610 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Trre13g00610 518 SUPERFAMILY Cytochrome P450 35 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00610 518 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00610 518 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00610 518 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00610 518 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00610 518 Pfam Cytochrome P450 35 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00610 518 Coils Coil 242 262 - -
Trre13g00610 518 PANTHER STEROID 21-HYDROXYLASE-RELATED 19 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00610 Trre-Chr13 4703434 4706107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00610 12 511 Cytochrome P450 AT5G06900 40.272 6.19e-129 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00610 K23179 - psat:127128210 801.586