Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00606 ATGTCCAGAGAAAAACTTTTGCTTATACGATTTGCATATCAGAGTCTTGGTGTTGTTTATGGAGATTTGGGAACTTCACCATTATATGTTTTCTATAACACATTTCCTCATGGAGTTGATGATCCAGAGAAAGTTATTGGAGCACTTTCTTTAATCATATACTCTCTCACTCTCGTGCCTCTGCTCAAATATGTTTTAATTGTATTAAGAGCAAATGACAATGGTCAAGGCGGAACGCTAGCTCTTTATTCCTTGCTATGCCGACATGCAAATATAAAGATAATGCCAAACCAGCATCGTACAGATGAAGAGTTGACGACATATAGCCGGACCATCTCTCTTGAGAATTCATTTGCTGCAAAAACTCAAAGGTGGTTAGAGGGACGACCATTTATTAAAAGAACCATTCTTGTTGTTGTCCTTGTTGGTACATGTATGGTGATTGGAGATGGTATTCTTACCCCAGCTATATCTGTTTTATCAGCTGTTGGTGGCATCAAGGTAAATCGCTCTGAAGTGGATAGTGATGTGGTTGTGATTGTTGCTGTTGTAATATTAGCTGGACTATTCAGCATGCAACATTATGGTACAAATAAAGTTGCCATGCTCTTTGCTCCAATTGTTCTTCTTTGGTTTCTCTTAATTGGAGGTATAGGTATATACAACATCTCGAGATATGGTGGCAGTGTCCTAAAAGCATTTTCACCTTTGTACATGTATCGATATCTAAGAAATGGAGGCAAAGATAATTGGCTTTCCCTTGGTGGAATTTTGCTTAGCATAACAGGGACAGAAGCTCTTTTTGCCGACTTAGCCAATTTTCCAGTCTCATCCGTACAAATTGCATTTACTTTTGTTGTGTTTCCTTGCCTTCTTTTAGCATATTCTGGACAGGCTGCTTATCTAGTGAATAACTTGGAACATTCAAGAGCGGTTTTTTATCGTTGTATTCCAGACGAAATATATTGGCCAGTATTTGTTATTGCAACACTGGCAGCAATAGTTGCAAGTCAAGCCACAATAACCGCAACCTTTTCAATCATTAAACAAGCCCTTGCTCATGGATGTTTCCCGAGAGTCAAAGTTGTACATACATCGAAAAATGTTGCTGGCCAGATATATATTCCGGATATCAATTGGATCCTTATGGTTCTTTGCATAGCTGTTACAGTCGGCTTTAGAAATGAAATCCAGATTGGAAATGCTTATGGCACTGCAGTTGTGTTAGTCATGTTATTTACAACATTGTTGATGACTTTGGTAATGATATTAGTTTGGCACTGTCATTGGATTCTTGTTGTTTTGTTCACCGGCTTATCATTGATTATCGAATGTACATATTTCTCTGTTGTACTCTTCAAAGTCGATCAAGGTGGATGGGTTCCCCTTGCAATTGCCGGAGTTTTTATGATTGTTATGTATGTTTGGCATTATGGTACGGTGAAGCGCTACGAGTTTGAATTGCATAGCAAAGTCTCAATGGCATGGATTCTCAATCTCGGCCCTAGTTTAGGACTAGTTCGTGTACCTGGAATCGGTTTAGTCTATACAGAGCTCGCAAGCGGAGTTCCCCACATTTTTTCTCATTTCATCACAAACCTACCAGCAATCCATTCTGTTGTTGTTTTCGTCTGTGTGAAATATCTTCCTGTCTACACTGTCCCCGAAGATGAACGTTTCCTTATCAGGCGTATTGGACCAAATAATTTCCACATTTTTAGGTGCGTGGCGCGATATGGATATAAAGACTTGCATAAGAAAGACGATGATTTCGAGAAGAAGCTCTTTGACAACCTTTTCATGTCTGTTCGACTTGAGTTGATGATGGAATGTTCCTCAGATTCGGAATACAGTTCATGTGAACCACAAATTGAACAGTCGAAAAATTTCACAGCGAATAACAACGGAAACACAACTTCATCGAGTAACGTGGATTTCTCAATTTCATCAGTAGATTCGACAATTCATTCCAAATCACCATCTTATGTGAATATTACTATTCAATCTTCTAGTCAATGTACCGAGGTTGACGAACTCGAATTCTTAAACAAGTGTAGAGAAGCCGGTGTTGTTCACATACTTGGAAACACAGTTGTGAGAGCTAGTAGGGATTCAAGTTTCTACAAGAAAATAGCTGTTGATTATATATATGCATTTCTTAGAAAAATATGCAGGGAAAATAGTATGTTCTTAAATATTCCTCATGAGAGTCTCTTAAATGTTGGTCAAGTTTTCTATGTATAA 2244 0.3832 MSREKLLLIRFAYQSLGVVYGDLGTSPLYVFYNTFPHGVDDPEKVIGALSLIIYSLTLVPLLKYVLIVLRANDNGQGGTLALYSLLCRHANIKIMPNQHRTDEELTTYSRTISLENSFAAKTQRWLEGRPFIKRTILVVVLVGTCMVIGDGILTPAISVLSAVGGIKVNRSEVDSDVVVIVAVVILAGLFSMQHYGTNKVAMLFAPIVLLWFLLIGGIGIYNISRYGGSVLKAFSPLYMYRYLRNGGKDNWLSLGGILLSITGTEALFADLANFPVSSVQIAFTFVVFPCLLLAYSGQAAYLVNNLEHSRAVFYRCIPDEIYWPVFVIATLAAIVASQATITATFSIIKQALAHGCFPRVKVVHTSKNVAGQIYIPDINWILMVLCIAVTVGFRNEIQIGNAYGTAVVLVMLFTTLLMTLVMILVWHCHWILVVLFTGLSLIIECTYFSVVLFKVDQGGWVPLAIAGVFMIVMYVWHYGTVKRYEFELHSKVSMAWILNLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEDERFLIRRIGPNNFHIFRCVARYGYKDLHKKDDDFEKKLFDNLFMSVRLELMMECSSDSEYSSCEPQIEQSKNFTANNNGNTTSSSNVDFSISSVDSTIHSKSPSYVNITIQSSSQCTEVDELEFLNKCREAGVVHILGNTVVRASRDSSFYKKIAVDYIYAFLRKICRENSMFLNIPHESLLNVGQVFYV 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00606 747 Pfam K+ potassium transporter 13 583 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre13g00606 747 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 10 745 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre13g00606 747 NCBIfam potassium uptake protein 12 747 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00606 Trre-Chr13 4679803 4683767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00606 17 747 Inorganic Solute Cotransporters AT2G35060 71.935 0.0 1078
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00606 K03549 - gmx:100796449 1139.02