Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00602 ATGGAAAATTCTAATGAAAATGGTTTCAACCAAAAAATTAATGTAAAATTAACAAGTGAACCAACACTTGTTCCACCATCTGAAGAAACAAAGAAAGGAATGTATTTCTTATCAAACCTTGATCAAAACATTGCTGTAATTGTAAGAACTGTTTATTGTTTTAAAAATGAAGAGAAAGGAAATGAGAATGCTAATGAAGTGATTAAGAATGCATTAAAGGATGTTCTTGTTTATTATTATCCTCTTGCTGGGAGATTAAGTATAAGCTCAGAGGGTAAACTGATTGTGGATTGTACTGGAGAAGGTGCTCTTTTTGTTGAAGCTGAAGCTAATTGTTCAATGGAAGAAATTGGTGATATTACAAAACCTGATCCTAGGACTCTTGGTATGTTGGTTTATGATATTCCTGATGCTAAACATATTCTTCATATGCCTCCTTTGGTTGCTCAGGTAACCAAGTTTAAGTGTGGAGGTTTTTCTCTTGGACTATGCATGAATCATTGCATGTTTGATGGCATTGGAGCTATGGAGTTTGTGAACTCATGGGGAGAATTAGCAAGAGGCCAACCACTCTCAATCCCTCCAGTTCTAGACAGAACCATTCTAAAGGCGCGCAATCCGCCAAAGATAGAACATTTGCACCAAGAATTTGCTGATATTGAAGACAAATCAAATACAAATAGCTTATATGAAGATGAAATGGTGTATAGATCATTTTGTTTTGATCTTGAGAAACTAAAAGAATTGAAGAAAAAAGCTATGGAAGATGAAAATGGTGTTCTTCAATCTTGCACAACATTTGAAGTTCTTTCAGCATTTGTTTGGATAGCTAGAACAAAAGCACTTAAACTTTTGCCAGAACAAGAAACTAAGCTTCTTTTTGCTGTTGATGGAAGGGCTAAATTTGAACCAAAACTTCCAAAAGGGTATTTTGGGAATGGAATTGTACTTACAAAATCGGTTTGTAAAGCAGGTGAAATTACGAACAAGCCCTTATCGTATACGGTGAAGGCTATTCAAGAAGCAATTAAGAGTGTCACAGATAGTTACATGAGATCAGCTATTGATTATTTTGAGGTAACAAGAGCTAGGCCTTCTTTGGCTTGTACACTTTTGATCACAACTTGGTCGCGGCTTCCGTTTCATACCACCGATTTCGGTTGGGGAGAACCTGTTCTGTCTGGACCGGTTTCGTTGCCCGAGAAGGAAGTGATTTTGTTCCTTTCACATGGTCAAGAGAGGAGAAGCATTAATGTGCTTCTTGGTTTACCTGCTCCTGTCATGAAGATCTTTCAAGATTTGATGCAGATATAG 1314 0.3683 MENSNENGFNQKINVKLTSEPTLVPPSEETKKGMYFLSNLDQNIAVIVRTVYCFKNEEKGNENANEVIKNALKDVLVYYYPLAGRLSISSEGKLIVDCTGEGALFVEAEANCSMEEIGDITKPDPRTLGMLVYDIPDAKHILHMPPLVAQVTKFKCGGFSLGLCMNHCMFDGIGAMEFVNSWGELARGQPLSIPPVLDRTILKARNPPKIEHLHQEFADIEDKSNTNSLYEDEMVYRSFCFDLEKLKELKKKAMEDENGVLQSCTTFEVLSAFVWIARTKALKLLPEQETKLLFAVDGRAKFEPKLPKGYFGNGIVLTKSVCKAGEITNKPLSYTVKAIQEAIKSVTDSYMRSAIDYFEVTRARPSLACTLLITTWSRLPFHTTDFGWGEPVLSGPVSLPEKEVILFLSHGQERRSINVLLGLPAPVMKIFQDLMQI 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00602 437 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 433 - -
Trre13g00602 437 Gene3D - 217 436 IPR023213 -
Trre13g00602 437 FunFam Tryptamine hydroxycinnamoyl transferase 221 436 - -
Trre13g00602 437 Gene3D - 9 216 IPR023213 -
Trre13g00602 437 FunFam Spermidine hydroxycinnamoyl transferase 13 217 - -
Trre13g00602 437 Pfam Transferase family 20 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00602 Trre-Chr13 4661505 4663735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00602 12 435 Monolignol Biosynthesis Gene Families AT5G48930 35.308 9.71e-85 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00602 K15400 - gmx:100804504 740.339