Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00599 ATGGCATCTCAATCCTCCAGCAGCTCTTCCACTTCACAACATCAAGATGCAAACAAACAAAATCAACACCCAAACTCTAATTCGAACAATCTTGACTTCATAAAGTTATGGAAAGATGATTTGGTTCATGGGTCTAACTTGAAAGAGTACAACTTTTTTGGCCCTATTCAAGTTGGTTCTTCATCTTCTTCATCTTGTACCATAATTTGGTCTATTAATATAATTTGCAGTTCAAAAAAAAAAAAAAAAAATGATGAAGGAATAAATGAGAGCAAAAATCAAAATAAGAATTCTGATTCAAAGTCTTATCCATGCTCTTACTGCCCGGGTCAATATTCCTCTTTACAAGCATTAGGAGGGCACCAACATGCCCACAAAGCAGAACGCGCATTACAAATGCAACTGATTAACCAAAGGCCACTTGGAGTTCGAATTGAATCAATGATTCAAAAATCGCCTAATTCAATTAGCCCTAGGATTGGTCTTGGTGCTTTGCGTTTGCATGATATATTAAACCCTTCTCTTGTTAGCATGAGAAATAATACTGAAGGAAGTACCAGTGGGGTTGCAAGTCTAGGTATTGGTGGTGCAACTACTTCTACACATATCATTGCTCCTACTTCTACCATGGATGGGATTCGCAAGTTAAAGTCAAGTGATTTTGATTCTTCTGGACTTGATCTGTCACTTAAACTTTAA 699 0.3691 MASQSSSSSSTSQHQDANKQNQHPNSNSNNLDFIKLWKDDLVHGSNLKEYNFFGPIQVGSSSSSSCTIIWSINIICSSKKKKKNDEGINESKNQNKNSDSKSYPCSYCPGQYSSLQALGGHQHAHKAERALQMQLINQRPLGVRIESMIQKSPNSISPRIGLGALRLHDILNPSLVSMRNNTEGSTSGVASLGIGGATTSTHIIAPTSTMDGIRKLKSSDFDSSGLDLSLKL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00599 232 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 7 132 IPR044246 GO:0009788
Trre13g00599 232 SUPERFAMILY beta-beta-alpha zinc fingers 99 131 IPR036236 -
Trre13g00599 232 ProSitePatterns Zinc finger C2H2 type domain signature. 105 125 IPR013087 -
Trre13g00599 232 ProSiteProfiles Zinc finger C2H2 type domain profile. 103 130 IPR013087 -
Trre13g00599 232 MobiDBLite consensus disorder prediction 1 30 - -
Trre13g00599 232 Pfam C2H2-type zinc finger 103 127 - -
Trre13g00599 232 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00599 Trre-Chr13 4643568 4644356 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00599 76 147 C2H2 Transcription Factor Family AT3G09290 38.356 1.12e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00599 - - tpra:123892087 182.57