Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre13g00597 | ATGGCTTCCCAATCCTCTAGCAGTTCTTCCAATGTACAACATCTTAACAAACAAAATCAACTTCCAAACTCCAATTCTGTAGTGCAAGAGCACAATTTTTTCTGCCATGTGCAAGTTGGTTCTTCATCTGCTTTTTCTAATAACAATGAAGGAAAAGATGAGAGTAACAACGAAAAGAATAATTCTGATTCAAAGATTTATTCATGCAACTACTGCAAGGGTCAATATTCTTCTTTACAAGCATTAGGAGGGCACCAAAATGCCCACAAAGCAGAACGTGCGTTACAAATGCAACTAATCAAACAAAAGCCACTCGGGGTTAGAATGGAATCATCCATTCAAAAATCACCTTGTATTAGCCCTAGGATTGGTCTTGGTGCTTTGCGTTTGCATGATATATTAAACCCTTCTCTTGTTAGCATGAGAAATAATATTGAGGGAAGTAATGGTGGGGTTGCAAGTCCAGGTATCGGTGGTGCAACTACTTCTGCAAATGTGGTGGCTCCTACTTCTACCGTGGATGGCATTCGCAAGTTAAAGTCAAGTGATTTTGATTCTTCTGGACTTGATCTGTCACTAAAGCTTTAA | 588 | 0.3912 | MASQSSSSSSNVQHLNKQNQLPNSNSVVQEHNFFCHVQVGSSSAFSNNNEGKDESNNEKNNSDSKIYSCNYCKGQYSSLQALGGHQNAHKAERALQMQLIKQKPLGVRMESSIQKSPCISPRIGLGALRLHDILNPSLVSMRNNIEGSNGGVASPGIGGATTSANVVAPTSTVDGIRKLKSSDFDSSGLDLSLKL | 195 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre13g00597 | 195 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 67 | 94 | IPR013087 | - | |
Trre13g00597 | 195 | SUPERFAMILY | beta-beta-alpha zinc fingers | 63 | 95 | IPR036236 | - | |
Trre13g00597 | 195 | Pfam | C2H2-type zinc finger | 67 | 91 | - | - | |
Trre13g00597 | 195 | Gene3D | Classic Zinc Finger | 43 | 116 | - | - | |
Trre13g00597 | 195 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 69 | 89 | IPR013087 | - | |
Trre13g00597 | 195 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 13 | 96 | IPR044246 | GO:0009788 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre13g00597 | Trre-Chr13 | 4625551 | 4626279 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre13g00597 | 48 | 95 | C2H2 Transcription Factor Family | AT1G24625 | 45.833 | 1.72e-10 | 56.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre13g00597 | - | - | tpra:123892087 | 173.326 |