Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre13g00562 | ATGAATCAGGCTGCCTCCAACCCACAAAACACCGTCTTTGATGCTAAGAGACTGATTGGTGATGCTGCTAAGAATCAATCTGCCACCAATCCTGGAAACACCGTCTTTGATGCTAAGAGGTTAATTGGTAGAAAGTTTAGTGATTCTGTTGTCCAAAAAGACATAAGGTTCATTGGTGATTCTGCTAAGAATCAAGCAGCAACCAACCCCCAAAACACTGTTTTTGATGCTAAGAGGTTGATTGGTGATGCTGCTAAGAATCAGACTGCCTCCAACCCCGAAAACACCGTCTTCGATGTTAAGAGGTTGATTGGTGATGCCGCCAAAAACCAGACTGCTTCTAACCCAACCAACACCGTCTTTGATGCCAAGAGGCTAATCGGTAGAAAGTTTAGTGATTCTGATGTTCAGAATGATATGATGTTGTGGCCATTCAAGGTCATTGGGGAGAATGATGACAAACCTATGATTGTTGTTAATTACAATGAAATTCTCGAGGAATCTGTCAAAAAGAAAGAAATTCGTAAGGAAGGCCGCAATTGGTTTTCAAAGTTCTTCTCACGGAAATCATGA | 573 | 0.4171 | MNQAASNPQNTVFDAKRLIGDAAKNQSATNPGNTVFDAKRLIGRKFSDSVVQKDIRFIGDSAKNQAATNPQNTVFDAKRLIGDAAKNQTASNPENTVFDVKRLIGDAAKNQTASNPTNTVFDAKRLIGRKFSDSDVQNDMMLWPFKVIGENDDKPMIVVNYNEILEESVKKKEIRKEGRNWFSKFFSRKS | 190 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre13g00562 | 190 | SUPERFAMILY | Actin-like ATPase domain | 55 | 89 | IPR043129 | - | |
Trre13g00562 | 190 | Gene3D | - | 105 | 169 | - | - | |
Trre13g00562 | 190 | Gene3D | - | 16 | 54 | - | - | |
Trre13g00562 | 190 | Gene3D | - | 55 | 80 | - | - | |
Trre13g00562 | 190 | Gene3D | - | 81 | 104 | - | - | |
Trre13g00562 | 190 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 102 | 169 | IPR013126 | GO:0005524|GO:0140662 | |
Trre13g00562 | 190 | SUPERFAMILY | Actin-like ATPase domain | 14 | 55 | IPR043129 | - | |
Trre13g00562 | 190 | SUPERFAMILY | Actin-like ATPase domain | 102 | 161 | IPR043129 | - | |
Trre13g00562 | 190 | Pfam | Hsp70 protein | 102 | 163 | IPR013126 | GO:0005524|GO:0140662 | |
Trre13g00562 | 190 | Pfam | Hsp70 protein | 17 | 57 | IPR013126 | GO:0005524|GO:0140662 | |
Trre13g00562 | 190 | FunFam | heat shock 70 kDa protein-like | 121 | 174 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre13g00562 | Trre-Chr13 | 4363707 | 4383833 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre13g00562 | 6 | 57 | Calmodulin-binding Proteins | AT5G02500 | 66.038 | 1.19e-15 | 72.4 |