Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00562 ATGAATCAGGCTGCCTCCAACCCACAAAACACCGTCTTTGATGCTAAGAGACTGATTGGTGATGCTGCTAAGAATCAATCTGCCACCAATCCTGGAAACACCGTCTTTGATGCTAAGAGGTTAATTGGTAGAAAGTTTAGTGATTCTGTTGTCCAAAAAGACATAAGGTTCATTGGTGATTCTGCTAAGAATCAAGCAGCAACCAACCCCCAAAACACTGTTTTTGATGCTAAGAGGTTGATTGGTGATGCTGCTAAGAATCAGACTGCCTCCAACCCCGAAAACACCGTCTTCGATGTTAAGAGGTTGATTGGTGATGCCGCCAAAAACCAGACTGCTTCTAACCCAACCAACACCGTCTTTGATGCCAAGAGGCTAATCGGTAGAAAGTTTAGTGATTCTGATGTTCAGAATGATATGATGTTGTGGCCATTCAAGGTCATTGGGGAGAATGATGACAAACCTATGATTGTTGTTAATTACAATGAAATTCTCGAGGAATCTGTCAAAAAGAAAGAAATTCGTAAGGAAGGCCGCAATTGGTTTTCAAAGTTCTTCTCACGGAAATCATGA 573 0.4171 MNQAASNPQNTVFDAKRLIGDAAKNQSATNPGNTVFDAKRLIGRKFSDSVVQKDIRFIGDSAKNQAATNPQNTVFDAKRLIGDAAKNQTASNPENTVFDVKRLIGDAAKNQTASNPTNTVFDAKRLIGRKFSDSDVQNDMMLWPFKVIGENDDKPMIVVNYNEILEESVKKKEIRKEGRNWFSKFFSRKS 190
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00562 190 SUPERFAMILY Actin-like ATPase domain 55 89 IPR043129 -
Trre13g00562 190 Gene3D - 105 169 - -
Trre13g00562 190 Gene3D - 16 54 - -
Trre13g00562 190 Gene3D - 55 80 - -
Trre13g00562 190 Gene3D - 81 104 - -
Trre13g00562 190 PANTHER HEAT SHOCK PROTEIN 70KDA 102 169 IPR013126 GO:0005524|GO:0140662
Trre13g00562 190 SUPERFAMILY Actin-like ATPase domain 14 55 IPR043129 -
Trre13g00562 190 SUPERFAMILY Actin-like ATPase domain 102 161 IPR043129 -
Trre13g00562 190 Pfam Hsp70 protein 102 163 IPR013126 GO:0005524|GO:0140662
Trre13g00562 190 Pfam Hsp70 protein 17 57 IPR013126 GO:0005524|GO:0140662
Trre13g00562 190 FunFam heat shock 70 kDa protein-like 121 174 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre13g00562 Trre-Chr13 4363707 4383833 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00562 6 57 Calmodulin-binding Proteins AT5G02500 66.038 1.19e-15 72.4