Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00540 ATGGCAATAGAACACACAAGAATCACTATCCGTCCATTCATAGAAAGTGACATTGAAGATGTGTTGTTATGGTTAGGTGATAATAGAGTTCTTCAAAATACCCGAATGGAGACTTCTAATTCAAAAGAAGAAGCTTTAGATTTCATAAAAACCAAATGGATTTACCCATTGCATCAATCAATATGTCTTGATGACCACTCCATTGGAGTTATTTGGGTCCTTCCTTATGATAATGAGAAGCATAAAGCAGATTTGGGGTATGCCATTGGATGTAATTATTGGGGTCAAGGTATAGTCACCAAAGCATTGAAGATTCTTTTGTGTAAAGTGTTTCAAGAGTTCCCTCATTTGCATAGGTTGCAAGCTCATACTCTTGTGGAGAATAAGGCTTCTCAAAGGGTGTTGGAAAAAGTTGGATTCCATAGGGAAGGATTGCTTAGAAAGCTTTTTTGTCACAAAGATGTAAGTAGATCCAGAACCACATAG 486 0.3704 MAIEHTRITIRPFIESDIEDVLLWLGDNRVLQNTRMETSNSKEEALDFIKTKWIYPLHQSICLDDHSIGVIWVLPYDNEKHKADLGYAIGCNYWGQGIVTKALKILLCKVFQEFPHLHRLQAHTLVENKASQRVLEKVGFHREGLLRKLFCHKDVSRSRTT 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00540 161 Gene3D - 1 159 - -
Trre13g00540 161 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 5 157 - -
Trre13g00540 161 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 2 155 IPR016181 -
Trre13g00540 161 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 161 IPR000182 GO:0016747
Trre13g00540 161 Pfam Acetyltransferase (GNAT) domain 7 141 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00540 Trre-Chr13 4143499 4148822 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre13g00540 Acetyltransf_3 4.8e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00540 - - tpra:123891489 285.804