Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00532 ATGAACCCAACCAACACCGTCTTTGATGCAAAGCGTTTGATTGGAAGGAGAATTTCTGATGCCTCTGTTCAGAGTGATATGAAGTTGTGGCCCTTTAAGGTCATTGCTGGTCCTGGTGAGAAGCCTATGATTGGTGTTAACTACAAGGCGTCAGGCAACCAAAGATGCTGGGGTTATTGCTGGTCTCAATGTTATGAGAATTATCAATGA 210 0.4381 MNPTNTVFDAKRLIGRRISDASVQSDMKLWPFKVIAGPGEKPMIGVNYKASGNQRCWGYCWSQCYENYQ 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00532 69 PANTHER HEAT SHOCK PROTEIN 70KDA 5 49 IPR013126 GO:0005524|GO:0140662
Trre13g00532 69 Pfam Hsp70 protein 1 49 IPR013126 GO:0005524|GO:0140662
Trre13g00532 69 Gene3D - 8 56 - -
Trre13g00532 69 SUPERFAMILY Actin-like ATPase domain 1 52 IPR043129 -
Trre13g00532 69 FunFam heat shock 70 kDa protein-like 8 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00532 Trre-Chr13 4100573 4101563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00532 1 50 Calmodulin-binding Proteins AT5G02500 80.000 1.75e-24 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00532 K03283 - csin:114255897 99.7525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00532 13 4100573 4101563 Trre13g00532 13 4100573 4101563 ECH