Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00531 ATGAGGAGCACAAGAAGAAGTTCAAAGCTTTCTGCAGGTGACAAGAAACAAATTGAGGATGCAATTGAAGGTGCCATTCAATGGCTTGATGCCAATCAGCTAGCTGAAGCTGATGAATTCGAAGACAAGATGAAGGAGCTTGAAACTGTTTGCAATCCTATCATTGCAAAGATGTACCAAGGTGGAGCTGGTGAAGGTGCTGATGTTGATGATGATGCTGCCCCACCTCCAAGTGGCAGCGGCGGTGCTGGCCCCAAGATTGAGGAGGTCGACTAA 276 0.4746 MRSTRRSSKLSAGDKKQIEDAIEGAIQWLDANQLAEADEFEDKMKELETVCNPIIAKMYQGGAGEGADVDDDAAPPPSGSGGAGPKIEEVD 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00531 91 Gene3D - 1 91 IPR029048 -
Trre13g00531 91 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 6 65 IPR029048 -
Trre13g00531 91 MobiDBLite consensus disorder prediction 62 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00531 Trre-Chr13 4099159 4099505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00531 1 91 Calmodulin-binding Proteins AT5G02490 64.356 3.64e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00531 K03283 - gmx:100787543 121.709