Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00522 ATGGCAGGAAAAGGTGAAGGACCTGCAATCGGAATCGATCTCGGAACTACTTACTCTTGCGTTGGAGTATGGCAACACGATCGCGTTGAGATCATTGCCAATGATCAAGGAAACCGTACTACTCCGTCGTATGTTGCTTTCACTGATAGTGAAAGGTTGATCGGTGATGCCGCTAAGAATCAAGTCGCCATGAATCCTGTTAACACCGTCTTCGATGCTAAGCGTTTGATTGGAAGAAGAGTTTCTGATGCCTCTGTTCAGAGTGACATGAAGCTATGGCCATTCAAGGTTATCGCTGGTCCTGGTGAGAAGCCTATGATTGGTGTTAACTATAAGGGTGAGGATAAACAGTTTGCTGCTGAGGAAATTTCCTCAATGGTGCTTATGAAGATGCGTGAGATTGCCGAAGCTTATCTCGGTTCAGCTGTGAAGAATGCTGTTGTGACTGTTCCTGCTTACTTCAATGACTCTCAGCGTCAAGCCACAAAGGACGCTGGTGTCATTGCTGGTCTCAATGTTATGAGAATTATCAATGAGCCAACTGCTGCAGCTATTGCTTATGGGCTTGACAAGAAGGCTACAAGTGTTGGTGAGAAGAATGTGTTGATCTTTGATTTGGGAGGTGGTACTTTTGATGTATCTCTTCTTACTATTGAAGAGGGTATTTTTGAAGTTAAAGCCACTGCTGGTGATACCCATCTTGGTGGTGAAGATTTTGATAATAGAATGGTTAACCATTTTGTTCAAGAGTTCAAGAGGAAGAATAAGAAGGATATTAGTGGAAACCCAAGAGCTCTTAGGAGGTTGAGAACTGCTTGTGAGAGAGCAAAGAGAACTCTCTCATCAACTGCACAGACAACAATTGAAATTGATTCTCTTTATGAAGGTGTTGATTTTTACACCACAATTACTCGTGCTAGGTTTGAGGAACTTAACATGGATCTCTTTAGAAAGTGTATGGAGCCTGTTGAGAAGTGTTTGAGGGATGCAAAGATGGACAAGAACTCTGTTCATGATGTTGTCCTTGTTGGTGGTTCAACTAGGATTCCTAAAGTTCAACAGTTGTTGCAAGACTTCTTCAATGGTAAGGAGCTTTGCAAGAGCATCAACCCCGACGAGGCTGTTGCATATGGAGCTGCTGTTCAAGCAGCTATCTTGAGCGGCGAAGGTAATGAAAAGGTTCAAGATTTGTTGCTTTTGGATGTCACCCCACTGTCTCTTGGTTTGGAAACAGCTGGTGGTGTCATGACTGTACTCATTCCAAGGAACACAACAATCCCAACCAAGAAGGAGCAAGTTTTCTCTACTTACTCAGACAATCAACCCGGTGTCTTGATCCAAGTTTATGAAGGTGAGAGAGCAAGAACAAGAGACAACAACTTGTTGGGTAAATTCGAGCTTTCCGGCATTCCTCCAGCTCCCCGTGGAGTTCCTCAAATCACTGTCTGTTTTGACATTGACGCCAATGGTATCTTGAATGTCTCTGCTGAGGACAAAACAACCGGGCAGAAGAACAAGATCACCATCACAAACGACAAAGGTAGACTCTCGAAGGAAGAAATCGAGAAGATGGTTGAGGAAGCAGAGAAATACAAGGCCGAAGATGAAGAACACAAGAAGAAGGTCGATGCAAAGAATGCCTTGGAAAACTATGCTTACAACATGAGGAACACAATTAAAGATGAGAAGATTGGATCAAAGCTTTCACCTGAAGACAAGAAGAAAATTGATGATGCAATTGAGGCTTCCATTCAATGGTTGGATAGCAACCAATTGGCAGAGGCAGATGAGTTTGAAGATAAGATGAAGGAACTTGAGAATCTTTGCAACCCAATCATTGCTAAGATGTATCAAGGTGGTGGTGCTCCTGATATGGCTGGTGGTATGGATGATGAAGTTCCTCCAGCTGCAGGTGGTGCTGGTCCCAAGATCGAAGAAGTTGATTAA 1947 0.433 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRVSDASVQSDMKLWPFKVIAGPGEKPMIGVNYKGEDKQFAAEEISSMVLMKMREIAEAYLGSAVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKNSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVEEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDEKIGSKLSPEDKKKIDDAIEASIQWLDSNQLAEADEFEDKMKELENLCNPIIAKMYQGGGAPDMAGGMDDEVPPAAGGAGPKIEEVD 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00522 648 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Trre13g00522 648 FunFam Heat shock protein 70 10 196 - -
Trre13g00522 648 Coils Coil 588 608 - -
Trre13g00522 648 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Trre13g00522 648 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Trre13g00522 648 Gene3D - 10 384 - -
Trre13g00522 648 Gene3D - 71 126 - -
Trre13g00522 648 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Trre13g00522 648 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Trre13g00522 648 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 389 531 IPR029047 -
Trre13g00522 648 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 624 IPR029048 -
Trre13g00522 648 PRINTS 70kDa heat shock protein signature 209 219 - -
Trre13g00522 648 PRINTS 70kDa heat shock protein signature 337 353 - -
Trre13g00522 648 PRINTS 70kDa heat shock protein signature 396 415 - -
Trre13g00522 648 PRINTS 70kDa heat shock protein signature 8 21 - -
Trre13g00522 648 PRINTS 70kDa heat shock protein signature 477 493 - -
Trre13g00522 648 PRINTS 70kDa heat shock protein signature 36 48 - -
Trre13g00522 648 PRINTS 70kDa heat shock protein signature 146 166 - -
Trre13g00522 648 PRINTS 70kDa heat shock protein signature 369 389 - -
Trre13g00522 648 PRINTS 70kDa heat shock protein signature 58 66 - -
Trre13g00522 648 FunFam Heat shock 70 kDa 391 545 - -
Trre13g00522 648 FunFam Heat shock 70 kDa 235 318 - -
Trre13g00522 648 FunFam heat shock 70 kDa protein-like 71 126 - -
Trre13g00522 648 PANTHER HEAT SHOCK PROTEIN 70KDA 9 581 IPR013126 GO:0005524|GO:0140662
Trre13g00522 648 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Trre13g00522 648 FunFam Heat shock 70 kDa protein 539 648 - -
Trre13g00522 648 Coils Coil 514 541 - -
Trre13g00522 648 Gene3D - 539 648 IPR029048 -
Trre13g00522 648 MobiDBLite consensus disorder prediction 621 648 - -
Trre13g00522 648 Gene3D Actin; Chain A, domain 4 235 318 - -
Trre13g00522 648 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Trre13g00522 648 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Trre13g00522 648 Gene3D - 192 366 - -
Trre13g00522 648 FunFam Heat shock 70 kDa protein 197 260 - -
Trre13g00522 648 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00522 Trre-Chr13 4052967 4055333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00522 1 648 Calmodulin-binding Proteins AT3G12580 92.627 0.0 1225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00522 K03283 - gmx:100787543 1203.35