Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00476 ATGAAGTATATCAAAGGAACCTTTACAATTGAGGCTTACCCGTTGGTAGATGAACTGACATCGAAGATCAGTACTTTAAATTTGGAACGCGCTTATCGGTTGAAAAGCAGACTTGTTGCCCTGACTAGGAGGGTTCAGAAGGTTAGAGACGAAATAAAGCAACTTATGGATAATGACGGTGATATGGCTGAAATCTCATTGAGCTCCCTTCAGAACAATGCAGCAGATGGTGGAGTCCACATCTGCCAAGTGGAAGACACTATTGATGTTGAATTCATAAAAAACACTTACATCTGA 297 0.4074 MKYIKGTFTIEAYPLVDELTSKISTLNLERAYRLKSRLVALTRRVQKVRDEIKQLMDNDGDMAEISLSSLQNNAADGGVHICQVEDTIDVEFIKNTYI 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00476 98 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 9 70 IPR039204 -
Trre13g00476 98 Coils Coil 38 58 - -
Trre13g00476 98 Gene3D Magnesium transport protein CorA, transmembrane region 6 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00476 Trre-Chr13 3757427 3760051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00476 10 68 MRS2 Gene Family AT1G80900 88.136 1.25e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00476 K16075 - nnu:104609109 102.064