Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00419 ATGGATGCGCGTCGAGCTCCACGCGCCGTCATTGACCCTAAAGTTCGCAAGGTCGGGTTCTTCACTCCACCCGACCCGATTCCATTCGAATTTTCTCCCTCCGCCAATTCTATTTCTCCTGTCATGATCCCTCCGCCGCGTCATTCATCGGAAAATCCTGACCTCAATTCTCGTCCTTCCGGCGATGAAACAATTGCTGTCTCCGGTAACTGTAATAGCGTCTTGTCGGAGTTGTTTCCTGCTCCGAAGTCGCCGGTACCGTCTCCGAAGATTGGAAATGGAGATGGAGGTGGAATTGTGGCTTCTTCGTTTCCGAGAGGTGGATTTGACTTGACTGTGGTGAAGGCTAGTGGTGGAGTTCCGGTGTGTAAATTGACTACTGTTTCTGTCGTCAATGCTGATTCGTTTGCTATTGATGAAAGAGAGAAACCAAACAAAGGAGGAGGATCCACAATGGAAGTGAAAGACCAAGCTATCAATTCAAAACAGAAGAAAGATAAGTCCTCAAAAGCTGAAAGACGCGCCCTTCAAGAAGCTCAGCGAGCTGCAAAGGCTGCTGCAAAAGCTGAAGGAAATAAGGCATCTGGAACTGCAACTTCAGTGAATGTAAAATCAGCTAAAGCTGCCAAGCCCCCACAAAAAGTTGATAATAGTTCAGGTGCAGTTTCTGAGAAGAAGGGAGGTGATCGTCCATCAGAGAAGGATAGAAAAAAAGATGTTCCTCACCCACGCATGCAATATGATGATAAGAGCAGAGTGGAGAAAGCTAAACGCCGTGCTGTGGTAAACCAAATTGAAGCCAGGAACAGAGTTGAACTATTCAGACATTTGCCACAATACGAACACGGGAGTCAGCTTCCTGATCTTGAGGCAAAGTTTTTCCAGCTTGATCCTGTGCATCCTTCAGTTTATAAGGTGGGTTTGCAGTATCTGTCTGGAGATATATCTGGTGGAAATGCTCGTTGTATTGCTATGCTTCAAGCATTCCAGGATGCCATCAGAGACTACACAGTTCCATCTGAGAAGACTTTAGTGAGAGACTTGACGGCAAAAATAAGTAGCTATGTTTCATTCCTTATTGAGTGCCGACCTCTTTCAATCAGTATGGGAAATGCAATTAGATTTCTCAAAAGTCAAATTGCAAAGCTACCTCTGACACTGTCCGAGTCAGAATCAAAATCTTCTCTTCAATCAGATATTGAGAATTTTATATATGAGAAGATTATACTTGCTGACAAGGCGATAGTAGAGCATGCTGTCACAAAAATAAGAGATGGTGATGTTCTTCTTACTTATGGGTCATCATCAGCAGTTGAAATGATACTGTTACGTGCACATGAGTTAGGGAAACAGTTCCGAGTTGTAGTAGTAGACTCTCGTCCAAGGCTTAGAGGGAAATTTTTGCTTCGTAGACTAGTGGAGAAAGGTCTCAGTTGTACATACACTCATATCAATGCTGTTTCCTACATAATGCATGAAGTTACCCGAGTTTTTTTGGGTGCTTCATCAGTGTTGTCTAATGGAACAGTTTATTCAGGAGTTGGGACTGCATGTGTTGCAATGGTTGCTCATTCCTTCCATGTCCCTGTTATAGTTTGTTGTGAAGCTTTTAAATTTCATGAAAGGGTTCAGCTTGATTCAATATGCTCAAATGAACTTGGTGATCCAGATGCAATTTCAAAGGTTTCGGGTAGAGGGGATGTTAACCACTTAGATGCTTGGGCAGATACTGAAAATCTGCAACTTCTGAATCTGATCTATGATGCAACGCCTTCAGATTATGTTTCAATGATTGTCACAGATTATGGCATGATCCCCCCGACAAGTGTTCCTGTAGTTGTAAGGAAATATAACAGAGAGGTGTGGATATAA 1872 0.4322 MDARRAPRAVIDPKVRKVGFFTPPDPIPFEFSPSANSISPVMIPPPRHSSENPDLNSRPSGDETIAVSGNCNSVLSELFPAPKSPVPSPKIGNGDGGGIVASSFPRGGFDLTVVKASGGVPVCKLTTVSVVNADSFAIDEREKPNKGGGSTMEVKDQAINSKQKKDKSSKAERRALQEAQRAAKAAAKAEGNKASGTATSVNVKSAKAAKPPQKVDNSSGAVSEKKGGDRPSEKDRKKDVPHPRMQYDDKSRVEKAKRRAVVNQIEARNRVELFRHLPQYEHGSQLPDLEAKFFQLDPVHPSVYKVGLQYLSGDISGGNARCIAMLQAFQDAIRDYTVPSEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSQIAKLPLTLSESESKSSLQSDIENFIYEKIILADKAIVEHAVTKIRDGDVLLTYGSSSAVEMILLRAHELGKQFRVVVVDSRPRLRGKFLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSGVGTACVAMVAHSFHVPVIVCCEAFKFHERVQLDSICSNELGDPDAISKVSGRGDVNHLDAWADTENLQLLNLIYDATPSDYVSMIVTDYGMIPPTSVPVVVRKYNREVWI 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00419 623 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 34 620 - -
Trre13g00419 623 MobiDBLite consensus disorder prediction 134 255 - -
Trre13g00419 623 SUPERFAMILY NagB/RpiA/CoA transferase-like 272 617 IPR037171 -
Trre13g00419 623 MobiDBLite consensus disorder prediction 36 63 - -
Trre13g00419 623 MobiDBLite consensus disorder prediction 158 179 - -
Trre13g00419 623 Pfam Initiation factor 2 subunit family 315 607 IPR000649 GO:0044237
Trre13g00419 623 Gene3D - 410 617 IPR042529 -
Trre13g00419 623 MobiDBLite consensus disorder prediction 78 99 - -
Trre13g00419 623 MobiDBLite consensus disorder prediction 226 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00419 Trre-Chr13 3236286 3241223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00419 1 620 Eukaryotic Initiation Factors Gene Family AT5G38640 63.706 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00419 K03680 - gmx:100785938 953.74