Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00336 ATGGCTATCTTCATTGGGATTCTTGGTTTGGTTTTTGTGTTCTGTTTTTGCTCTGCTCTTTTGAGATGGAATGAGTTAAGATACAGAAGGAAAGGTTTGCCACCAGGAACAATGGGGTGGCCTGTTTTTGGAGAGACAACTGAGTTTCTTAAACAAGGTCCTAACTTTATGAAAAATCAAAGGTCAAGGTATGGAAGTTTTTTCAAATCTCACATATTAGGGTGTCCTACAATTGTATCAATGGATCCTGAACTAAATAGATACATATTGATGAATGAATCAAAAGGGTTTGTTCCAGGATACCCTCAATCCATGTTAGATATCTTAGGAAAATGTAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGGACATTGCTTTCAATCATTAGCCCCACTTTAATTAGAAATCAGCTTTTACCTAAAATTGATGAGTTCATGAGAAAACACTTAAGTCATTGGGATAACAAAATCATCAACATTCAAGACAAAACTAAAGAGATGGCATTTCTCTCATCCTTGAAACAGATTGCTGGTATGGAGACAAGCTCAATTTCTCAACCTTTCATGACAGAGTTCTTTAAGCTTGTTATAGGAACTCTCTCCCTCCCTATTAACCTTCCCGGCACAAACTATCACAACGGATTACGGGCAAGGAAAAGTATTATTAGCATTTTGAGTAAGATACTAGAGGAAAGAAGAGCATCAAAAGATAACTATGAAGACATGCTTGGTTGTTTGATGAAAGGAAATGATGATAGATGCAAATTAAATGATGAGGAGCTTATTGATTTAATCATTACAATTATGTATTCTGGTTATGAAACTATTTCAACTACATCAATGATGGCTGTAAAGTACCTTCATGATCATCCTAAAGTTCTTGAAGAAATGAGAAAAGAGCATTTTGCTATTAGAGAAAGGAAAAAGCCAGAAGATCCTATTGATTGTAATGATCTCAAGTCAATGAGGTTTACTCGTGCGGTAATTTTTGAGACCTCGAGATTAGCTACAATAGTTAATGGAGTTCTGAGAAAAACAACTCATGACATGGAATTAAATGGCTATTTGGTTCCTAAAGGATGGAGGATATATGTATATACTAGAGAGATAAATTATGATCCATTTATTTATCATGATCCACTAACATTTAATCCATGGAGATGGCTCCAAGGTAATAATCTAGAGTCACAAAGTCATTTCTTGATATTTGGAGGAGGCACTAGACAATGTCCTGGAAAGGAGCTGGGAATAGCAGAAATTTCCACTTTTTTGCACTACTTTGTAACCAGATACAGATGGGAAGAAGTAGGAGGAGATAAACTAATGAAATTTCCTAGAGTTGTGGCACCAAATGGATTACACATAAGGGTCTCATCTTATTAA 1395 0.3584 MAIFIGILGLVFVFCFCSALLRWNELRYRRKGLPPGTMGWPVFGETTEFLKQGPNFMKNQRSRYGSFFKSHILGCPTIVSMDPELNRYILMNESKGFVPGYPQSMLDILGKCNIAAVHGSTHKYMRGTLLSIISPTLIRNQLLPKIDEFMRKHLSHWDNKIINIQDKTKEMAFLSSLKQIAGMETSSISQPFMTEFFKLVIGTLSLPINLPGTNYHNGLRARKSIISILSKILEERRASKDNYEDMLGCLMKGNDDRCKLNDEELIDLIITIMYSGYETISTTSMMAVKYLHDHPKVLEEMRKEHFAIRERKKPEDPIDCNDLKSMRFTRAVIFETSRLATIVNGVLRKTTHDMELNGYLVPKGWRIYVYTREINYDPFIYHDPLTFNPWRWLQGNNLESQSHFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPRVVAPNGLHIRVSSY 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00336 464 Gene3D Cytochrome P450 24 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00336 464 PANTHER CYTOCHROME P450 26 30 442 - -
Trre13g00336 464 Pfam Cytochrome P450 34 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00336 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Trre13g00336 464 FunFam Cytochrome P450 85A1 24 463 - -
Trre13g00336 464 CDD CYP90-like 60 462 - -
Trre13g00336 464 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00336 464 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00336 464 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00336 464 PRINTS E-class P450 group I signature 370 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00336 464 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00336 464 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00336 464 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00336 464 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00336 464 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00336 464 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00336 464 SUPERFAMILY Cytochrome P450 26 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00336 Trre-Chr13 2581093 2586254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00336 81 464 Cytochrome P450 AT5G38970 66.494 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00336 K09590 - gmx:100785414 837.795