Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00331 ATGCTTGTTAAATATTCACAGAATAAAAGTTCATCCAAGACACAATACTCAACAATTATAGAAGAGCTATGCCATCAATTTTCTCTAGAGGATCTTAAGAAATCAACCAATAACTTTGATGAAGTGCAAATAATTAGAAAATCACCATTCAGTATAGGGTACAAAGGTTATCTCAAACATAATGGTGAAATTGATTATCCGATAGCATTGAAGCGGATGCGAAATATATCAGATGAATGGAAGTACAAGAAGGAAATTGAACTCCACTGCCAGCTTCATCACCCAAATTTGACATCTTTAATAGGATTTTGTGACCAAAAAGATGAGAAAATTCTCGTGTATGACATGTTCAATGGAACTCTTTATGATCATTTACGTTCTAGGGATGTGGAATCACTATCATGGAAGAAAAGGCTTGAAATATGCATCGGAGTCGCAAGACGTCTACACTATCTACACACCGGAGCAAAGCGCACAAGTTTTCATTGTGACATAAAGCCTCAAACTATTCTATTAGATAACAATATGGTACCAAAACTCTCGCATCTTGGATTTTCCTTGCAAGGGAAGCTTTCTAAATCGAAGCCAAAATCAATTAAAGTTGACATCCTTATTGGTACATTGTTTTACATGGCACCAGAGTATGTCCGAACCAATACTTTTACAGATAAATGTGACGTTTACTCCTTGGGTATGGTTCTACTTGAAGTAGTATGCACAAATTACAACCTTACCATCTTTGATAAGATGAGAATGTTAGAGAACCCAAATTTGTTTATAGGACAGTCAATTGAAGCAGCTAACTTTTTGGAGAAGTTCTCAGCTAATGAGATTATTGATCCCATTCTCATGAGATTGATTGCACCAAAATGTTTAGCAGTGTTCATGGATATCATGAAAAGATGTTTGAATATAGAACCAAATGAAAGACCAATAATAGGTGAGGTTGAGGTTGAACTTGAGCATGCTCTGGCACTCCAGAAGGAAGCAGATGATGGGAAAAGTAATGGTGATTATAACTTTTTCATCACCGCCATTCCTACCTAA 1047 0.3601 MLVKYSQNKSSSKTQYSTIIEELCHQFSLEDLKKSTNNFDEVQIIRKSPFSIGYKGYLKHNGEIDYPIALKRMRNISDEWKYKKEIELHCQLHHPNLTSLIGFCDQKDEKILVYDMFNGTLYDHLRSRDVESLSWKKRLEICIGVARRLHYLHTGAKRTSFHCDIKPQTILLDNNMVPKLSHLGFSLQGKLSKSKPKSIKVDILIGTLFYMAPEYVRTNTFTDKCDVYSLGMVLLEVVCTNYNLTIFDKMRMLENPNLFIGQSIEAANFLEKFSANEIIDPILMRLIAPKCLAVFMDIMKRCLNIEPNERPIIGEVEVELEHALALQKEADDGKSNGDYNFFITAIPT 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00331 348 Gene3D Phosphorylase Kinase; domain 1 2 116 - -
Trre13g00331 348 PANTHER OS07G0166700 PROTEIN 23 327 IPR045272 GO:0004714|GO:0006468
Trre13g00331 348 Gene3D Transferase(Phosphotransferase) domain 1 117 342 - -
Trre13g00331 348 ProSiteProfiles Protein kinase domain profile. 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g00331 348 SUPERFAMILY Protein kinase-like (PK-like) 11 318 IPR011009 -
Trre13g00331 348 Pfam Protein kinase domain 65 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g00331 348 FunFam Receptor-like protein kinase ANXUR2 5 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00331 Trre-Chr13 2524642 2525808 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00331 6 332 Receptor kinase-like Gene Family AT3G51550 37.982 8.02e-59 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trre13g00331 Pkinase 1.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00331 - - mtr:25497582 486.493