Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00329 ATGTTTCTCAAATATTTGGGTTTCTACCATTGGTTTTGGAAGCATAGAAGGCACAATCCTATAGTAATAGAAGAGTTATGCCATCAATTTTCTCTAGCTAGTATTAAGAAATCGACCAACAACTTCGATAAAAATCGAATAATTGGAAGTGGGAGTTTAGGTATAGTGTACAAAGGTTGTCTTCAATTACATAACGATACTATTGATTCTACAGTTATAATCAAACGAGTTTATCCTATTACAGACAAAAAATTAAGAGAGTTTAGGAATGAAATTGAGTTGCTATGCCAACTTGATCATCCTAATTTGGTCAATTTATTAGGATATTGTGACCACAAAGATGAGAAGATTATTGTGTATGACTATAATTCCAATGGATCTCTCTATAATCTCCTTTGTTGTAAACATAGTAGCATGAAACCTCTTACATGGAAACAAAGGCTAAAGATATGCATAGGAGTAGCATGTGGATTACACTTTCTTCACACAGGAACCAAACGTGCCATCTTTCATTGTGACATTCATTCTCATAAGATTTTATTGGATAGCAATATGGTGCCTAAACTCTCAGATTTTTGGATTTCCTTGCAAGGTCCTTTGTTTACTTCAATGCCAAAACCAAAGTCTATATTAAATGATAACATTGTTGGTTCATATGGTTATGTGGCCCCCGAGATTTTAGAAAACAGTAAAGCAACATATAAGTGTGACGCTTACTCTTTTGGTATACTTCTACTAGAAGTGGTATGTTGCGAAAAGTTAGAAAATGTTAAGAAACAGAGACTCCCAATGGAAGAGAATATTGATGTGAATATCAAAGGAAACATTGCACCAGAATGTTGGGAAATATTTGTGGATGTCACAAAAAGATGCTTAAAGTATGATCCAAATGAACGACCAACAATGGGTGAAGTGGAGGTGCAACTTGAACTTGCTCTATCACTGCAGGAAAAAGCAGATAATAACAAAAACACCAATGTTGATGATGATCATTATATACTACCATCTACAACCATTATTGATGAATAA 1029 0.3401 MFLKYLGFYHWFWKHRRHNPIVIEELCHQFSLASIKKSTNNFDKNRIIGSGSLGIVYKGCLQLHNDTIDSTVIIKRVYPITDKKLREFRNEIELLCQLDHPNLVNLLGYCDHKDEKIIVYDYNSNGSLYNLLCCKHSSMKPLTWKQRLKICIGVACGLHFLHTGTKRAIFHCDIHSHKILLDSNMVPKLSDFWISLQGPLFTSMPKPKSILNDNIVGSYGYVAPEILENSKATYKCDAYSFGILLLEVVCCEKLENVKKQRLPMEENIDVNIKGNIAPECWEIFVDVTKRCLKYDPNERPTMGEVEVQLELALSLQEKADNNKNTNVDDDHYILPSTTIIDE 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00329 342 SUPERFAMILY Protein kinase-like (PK-like) 19 313 IPR011009 -
Trre13g00329 342 Gene3D Transferase(Phosphotransferase) domain 1 124 335 - -
Trre13g00329 342 ProSiteProfiles Protein kinase domain profile. 42 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g00329 342 Gene3D Phosphorylase Kinase; domain 1 10 122 - -
Trre13g00329 342 Pfam Protein tyrosine and serine/threonine kinase 45 308 IPR001245 GO:0004672|GO:0006468
Trre13g00329 342 PANTHER OS07G0166700 PROTEIN 27 316 IPR045272 GO:0004714|GO:0006468
Trre13g00329 342 FunFam Receptor-like protein kinase ANXUR2 12 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00329 Trre-Chr13 2521469 2523194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00329 17 325 Receptor kinase-like Gene Family AT1G30570 39.514 8.97e-69 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trre13g00329 PK_Tyr_Ser-Thr 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00329 - - gmx:100779112 422.935