Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00327 ATGCTTGTAAAATATTCGAAGCATAAAAGTTCATCCAAGAAACAATATCCAACAGTTATAGAAGAGCTATGCAACCAATTTTCTCTAGAAGATTTGAAGAAATCGACTAATAACTTTGATGAAGATCGAATAATTGGACGAACAGAATTCAGTATAGTGTACAAAGGTTATCTCAAACATAATGGTGAAACTGATTATCCAATTGCATTGAAACGAATGAGAAATATATTTGACGAATGGAAGTTCAATAAGGAAATTGAACTTCACTGCCAGCTTCATCACCCGAATTTGACATCTTTAATAGGATTTTGTGACCAAAAAGATGAGAAAATTATTGTGTATGAATACATGTTAAATGGCTCTCTCTATAATCATTTACGTTTAAGGGATATGGAATCACTGTCATGGAAGAAAAGGCTTGAAATATGCATTGGAGCTGCAAAAGGACTACACTACCTTCACACTGGAGCAAAACGAGCGATTTTTCACTGTGACATAAAGCCTCAAACCATTCTTTTAGATAATAGTATGGTACCAAAACTCTCGCATCTTGGATTTTCCTTACAAGGGAAGCTTTCTAAATCGAATCCAAAACCAATTAAAGTCGACATCCTTATTGGTACATTGCGTTACATGGCGCCAGAGTGTCTCTTAACCAACACTTTCACAGATAAATGTGACGTTTATTCCTTTGGTATAGTTCTACTCGAAGTAGCATGCACTAACTACAAGAATACCATCTTTGATAAGATGATCATGTTAGAGGACACAGATATGTTTACAAATCAGTCATTTAATCCAGCTAACTTTTTGGAGAGGTTTCCAGCTAATGAGATTATTGATCCAATTCTCATGAGATTGATTGCACCAAAATGTTTGGTAGTGTTCATGGATATCATGAAAAGATGCTTGAATATAGAACCAAATGAAAGACCAACAATGGGCGAGGTTGAGGTTGAACTTGAGCATGCTTTGGCACTGCAACAGGAAGCAGATGATGGGAAAAGTAATGGTGATTTTAACTTTTTTCCAACCACGATTTCTTCCTAA 1050 0.3552 MLVKYSKHKSSSKKQYPTVIEELCNQFSLEDLKKSTNNFDEDRIIGRTEFSIVYKGYLKHNGETDYPIALKRMRNIFDEWKFNKEIELHCQLHHPNLTSLIGFCDQKDEKIIVYEYMLNGSLYNHLRLRDMESLSWKKRLEICIGAAKGLHYLHTGAKRAIFHCDIKPQTILLDNSMVPKLSHLGFSLQGKLSKSNPKPIKVDILIGTLRYMAPECLLTNTFTDKCDVYSFGIVLLEVACTNYKNTIFDKMIMLEDTDMFTNQSFNPANFLERFPANEIIDPILMRLIAPKCLVVFMDIMKRCLNIEPNERPTMGEVEVELEHALALQQEADDGKSNGDFNFFPTTISS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00327 349 FunFam Receptor-like protein kinase ANXUR2 5 116 - -
Trre13g00327 349 SUPERFAMILY Protein kinase-like (PK-like) 12 320 IPR011009 -
Trre13g00327 349 ProSiteProfiles Protein kinase domain profile. 39 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g00327 349 Pfam Protein tyrosine and serine/threonine kinase 42 319 IPR001245 GO:0004672|GO:0006468
Trre13g00327 349 Gene3D Transferase(Phosphotransferase) domain 1 117 342 - -
Trre13g00327 349 PANTHER OS07G0166700 PROTEIN 23 328 IPR045272 GO:0004714|GO:0006468
Trre13g00327 349 Gene3D Phosphorylase Kinase; domain 1 2 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00327 Trre-Chr13 2517216 2518880 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00327 10 331 Receptor kinase-like Gene Family AT5G38990 40.367 3.25e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trre13g00327 PK_Tyr_Ser-Thr 9.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00327 - - mtr:25497582 514.227