Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00319 ATGGGTAATCTCTGTGCTCTTCTCAAACCAAAACAACAACAACAACCCTTTACATCCAAAAAACAGCGTTACTCAAACGCACCTTCAACAAGCCGCAGAGAGAAGAAAAAGTTTGATGATGCAATGATTCGTGAACAAGCAATTGCTGCTGCTTTACTTTACAAACAACATCAACAGAATCAGCAATTTGATCGATCAAGTTCGTTAAGGTATCCAAATGGTGTATCAAAAAGGAATAATGGTAGTAATTCTTTGCCTCGTAGTTCAAGTTCTAGAGCTAGATCACTTACTGACCCTCTTCTTCAACCTCATCAACTTATTAATCAGGGTATAAAGGTTGACGATCTCGAGACCAATCATTTTGTCCTTGTTCATGGAGGTGGCTTCGGGGCCTGGTGTTGGTACAAAACTATCGCACTTCTTGAAGAAAGTGGTTATAAAGTATCTGCTATAGATTTAACTGGTTCTGGAGTTCATTCATTTGATACAAACAACATTACAAGCTTGTCGCAATACGTAAAGCCTCTTACTGACTTCCTTGAAAAACTTCCCGAAGGCAAAAAGGTTATCTTGGTTGGACATGATTTCGGTGGAGCATGTATATCATATGCAATGGAGTTGTTTCCGCTTAAGATTTCAAAGGCTGTCTTTATAGCTGCCGCAATGCCGACTAACGGACAAAGTACTCTCGATATCATTTCACAACAGGCAGGTTCAAATGATCTCATGCCAAAGGCTCAGAATTTTTTGTATGCTAATGGAAACGATTGCCCTCCCACTGCTTTTGATCTGGACAAATCATTGTTAAGAGATTTGTTATTCAACCAAAGTCCCACCAAAGATGTTGCATTAGCATCTGTTTCGATGAGGTCGGTACCATTCGCACCAGTTTTAGAGAAACTTTCCCTTTCAGACCCAAAATACGGAACTGTTAGGCGGTTTTATATAAAAACACTCGAAGACAATGCCATACCTACTACACTCCAAGAAAACATGATAAATGCAAGCCCTCCAGAGAAGGTTTTCCATCTGAAGGGTGCTGATCATTCTCCTTTCTTCTCAAAGCCTCAAGCTCTGCATAAGCTGTTGGTAGAAATCTCAACGATCCTTTGA 1113 0.4016 MGNLCALLKPKQQQQPFTSKKQRYSNAPSTSRREKKKFDDAMIREQAIAAALLYKQHQQNQQFDRSSSLRYPNGVSKRNNGSNSLPRSSSSRARSLTDPLLQPHQLINQGIKVDDLETNHFVLVHGGGFGAWCWYKTIALLEESGYKVSAIDLTGSGVHSFDTNNITSLSQYVKPLTDFLEKLPEGKKVILVGHDFGGACISYAMELFPLKISKAVFIAAAMPTNGQSTLDIISQQAGSNDLMPKAQNFLYANGNDCPPTAFDLDKSLLRDLLFNQSPTKDVALASVSMRSVPFAPVLEKLSLSDPKYGTVRRFYIKTLEDNAIPTTLQENMINASPPEKVFHLKGADHSPFFSKPQALHKLLVEISTIL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00319 370 MobiDBLite consensus disorder prediction 60 99 - -
Trre13g00319 370 Gene3D alpha/beta hydrolase 113 368 IPR029058 -
Trre13g00319 370 Pfam Alpha/beta hydrolase family 121 359 IPR000073 -
Trre13g00319 370 MobiDBLite consensus disorder prediction 8 26 - -
Trre13g00319 370 SUPERFAMILY alpha/beta-Hydrolases 120 365 IPR029058 -
Trre13g00319 370 MobiDBLite consensus disorder prediction 1 39 - -
Trre13g00319 370 PANTHER METHYLESTERASE FAMILY MEMBER 118 367 IPR045889 -
Trre13g00319 370 FunFam putative methylesterase 11, chloroplastic 115 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00319 Trre-Chr13 2461982 2466828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00319 37 192 Miscellaneous Gene Families AT3G29770 66.250 2.13e-61 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00319 - - gmx:100818550 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00319 13 2461982 2466828 Trre13g00319 13 2461982 2466828 ECH