Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00314 ATGTCTGGAAAGGGTTTGAAATGTATGAAAGATGAAAAGCAAGATTTGCAGAAGCAGATTGGGTGTATTACTGGATTTTTTCAGCTCTTTTATCGCCACCGTTTCATCACAGGTCAACAATCTAGCAGATACATTCAAAATGCATCTTCTTCAGGTGTAACCAACAATGGAATCAAAGAGCTTAATAGTACAGTGCAGCAGAAACCAAAGGCAAAGAATAAAAAAAGTGCAAAAGAGAAGCAACAATTTTCCACAGAATCATCAATAACTTCTGTCTCTTCATCATGTTCATCTAGCATGTCATCCATTGAATTGAATGCAATAATTAAAACAAAATCATCATCAACCAAACAAATCCAAATTCCCAAAGAACCACATTCACGCCAACAATCACTTGATTTCTGTGATATTGTCAAAGATTCAATTCATAGAGAAGCTAAGGGATTATATGTGAATACATTAACCAAAGAAGAAAAAAAGGGCCAAGCTTATGCATTGAATCAACAAATAGATTCTCCAAGGCCTATGCTATCTCAAAACTTTGTCAATGCAAGAGTTATGGTTTCCAATGAACCATTACACACACTTTCAAGGTCGAAAAAATCACATTGGGACTCACCACGACTCTCTTACGATGCATTGAAATCCACTATAAGGAATAAGGAAATTCCTAGGCTTTCCTTGGACAGCAAGCAAGGATCCATCAGAGGGATTGAAGGAGGTAACAAGGCTCGCAATCTGTTGAATGGTTCACAAAGAGGGTATGAGAGGAACTCGAACACAATGCTTAATAAATTGCAAGAACCAGAAACAGCACAAAGGTCATCGAGTGTTGTAGCTAAGTTGATGGGACTAGAAGTTCTCCCAAACTCAAGACAAACTTGTCAGACTTCTATCTGCTCCGTCGATAAAAAAAAGCTCATGGACAGAACTAGCACAAGTGGTGAATCCAAGAAACACCATAGTTCAGCGTCCCCAAGGAATAGAAGGGATGATGATTCAATCACAAATGTGAAACCTTGTTCGCAATTTGCACTAGAACCGACGACTCCTTGGAGGCAACCTGATGCAGGCCAAAGTTCTTTGTTACAAGATTCTTCAAAGGAAAGCGACTCTGATATAAAAGCGTCAAAGCCTTCCCTTTCTGTATACGGTGAAATTGAGCAAAGGCTGACAGAACTTGAATTCAAAAAGTCCGGAAAGGACCTCAGAGCACTTAAACATATCCTTGAAGCAATGCAGAGATTTACTGATTCATCATCTGACACTAGGAATAATAATACTAGTGTCTGTGAAAATTCAAAAGTTCAAAGTCCAAGGATGCAACAAAAGGACTCGCGCTCGGAAACTATCACAGATGAGATGTCAAATTCGATAAAGGGTAGTAAATTACCCATTGTGATCGTGAAACCAACAAAAGTAACTAGAAAAGCCAATAATCCTGCTTCTACAGTATTGTCAATTAATGATAAATCTTGTATCAGCAAATGTTCTTCATCAAATGGAAGATTGGTTGATAAACAAAAAGTTAAAGGTATTGTTTCAACAACAAAAAATACCAAGGACCCTTTTGGTCAAATTGTTCCATCAAAATTGATGCAATCATCAAAATCTTTACAAGAAAGCAATCGAAAAAACACCATCAACTCTGGCAGCATAACAGGAACTGAGAGTCCAAGACTACAGAAGAAGTTTGGATTTGAGAGGTGTTCTCCGCCAACTAGTCCATCGTCAGATTCCACCGTTAACAGAAGACAGCATAATAGACAACAAAAATTCTCTATTTTGCAGGACAAAGATGAACATTTTAGTGAGATAAGGAAATTTAAGCATCATGTTAATGTCATTTTTGAGAATTTTGACAGTAACAGAAGCTTGGACACTCGAAGTGATATAAAAGTCATTCGAATCGATCAATCGGCAAATATCAATCAAAATAATGCATTTGAAGAGGTGAGTCAGGAAAGCTCGGAGGCAGATAAAATTGTCACTGCTGAACAGCCAAGTCCTGTATCTGTTCTAGATGCTGCATTCTATAAGGAAGATCCACCATCTCCGGTGAAAAAGCAATCGAGCGTTTCAAAATATTTAGGTGAAGCTCTAAGCACTGCTGATAGTGAGGAAAACACAGTGACTCAAATTCAGCAAGAAATTGACCGGATTGACGAGGAACTCATAAATTTTGAAAACATCAAGAATCCTGATCATAAGTATATATCAGAAATACTGATAGCATCAGGTCTAGTCAGTGACCGAAAGTCTAACCAAATACTTCATTCACAAGGTCACTTGATTAATCCAAAGTTATTCTTTGCACTTGAACAAGTAAAGGCAAATAAGTTGCATTTCAATATCAAAGATGACCCCGAGAAAATTTACAGGGCTATTAGTTTTGAGAAAATGCAAAGAAAACTCATATTTGATGCTGTTACTGACATGTTAGCTAACAAACTGATATATGAGAATTCTTCTAGAAAGCTAAAAGGGAAGCGGCTTTTCGAAGAGTTATGTCAAGAAATAGATGAGTTACAACCTCCAAATAGGAATGTCAGCAATGTTCATGAGGATGAGAATTTGACAAGTCTATTATGCAGAGATTTGAAGAATCACAACACAATTTGGACCAATTGTTGCAGTGAGAAACCAAATATCGTGTTAGATATCGAACGGTTGATCTTTAAAGATTTGATAACTGAAGTTTGTGAGAGATGA 2712 0.3721 MSGKGLKCMKDEKQDLQKQIGCITGFFQLFYRHRFITGQQSSRYIQNASSSGVTNNGIKELNSTVQQKPKAKNKKSAKEKQQFSTESSITSVSSSCSSSMSSIELNAIIKTKSSSTKQIQIPKEPHSRQQSLDFCDIVKDSIHREAKGLYVNTLTKEEKKGQAYALNQQIDSPRPMLSQNFVNARVMVSNEPLHTLSRSKKSHWDSPRLSYDALKSTIRNKEIPRLSLDSKQGSIRGIEGGNKARNLLNGSQRGYERNSNTMLNKLQEPETAQRSSSVVAKLMGLEVLPNSRQTCQTSICSVDKKKLMDRTSTSGESKKHHSSASPRNRRDDDSITNVKPCSQFALEPTTPWRQPDAGQSSLLQDSSKESDSDIKASKPSLSVYGEIEQRLTELEFKKSGKDLRALKHILEAMQRFTDSSSDTRNNNTSVCENSKVQSPRMQQKDSRSETITDEMSNSIKGSKLPIVIVKPTKVTRKANNPASTVLSINDKSCISKCSSSNGRLVDKQKVKGIVSTTKNTKDPFGQIVPSKLMQSSKSLQESNRKNTINSGSITGTESPRLQKKFGFERCSPPTSPSSDSTVNRRQHNRQQKFSILQDKDEHFSEIRKFKHHVNVIFENFDSNRSLDTRSDIKVIRIDQSANINQNNAFEEVSQESSEADKIVTAEQPSPVSVLDAAFYKEDPPSPVKKQSSVSKYLGEALSTADSEENTVTQIQQEIDRIDEELINFENIKNPDHKYISEILIASGLVSDRKSNQILHSQGHLINPKLFFALEQVKANKLHFNIKDDPEKIYRAISFEKMQRKLIFDAVTDMLANKLIYENSSRKLKGKRLFEELCQEIDELQPPNRNVSNVHEDENLTSLLCRDLKNHNTIWTNCCSEKPNIVLDIERLIFKDLITEVCER 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00314 903 MobiDBLite consensus disorder prediction 337 367 - -
Trre13g00314 903 MobiDBLite consensus disorder prediction 534 559 - -
Trre13g00314 903 MobiDBLite consensus disorder prediction 417 454 - -
Trre13g00314 903 MobiDBLite consensus disorder prediction 65 84 - -
Trre13g00314 903 MobiDBLite consensus disorder prediction 306 336 - -
Trre13g00314 903 MobiDBLite consensus disorder prediction 571 590 - -
Trre13g00314 903 MobiDBLite consensus disorder prediction 234 256 - -
Trre13g00314 903 Coils Coil 704 731 - -
Trre13g00314 903 Pfam Domain of unknown function (DUF4378) 735 899 IPR025486 -
Trre13g00314 903 MobiDBLite consensus disorder prediction 306 377 - -
Trre13g00314 903 PANTHER LONGIFOLIA PROTEIN 9 901 IPR033334 GO:0051513
Trre13g00314 903 MobiDBLite consensus disorder prediction 534 592 - -
Trre13g00314 903 MobiDBLite consensus disorder prediction 417 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00314 Trre-Chr13 2426149 2431702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00314 1 901 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 30.303 1.15e-71 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00314 - - mtr:25497547 1160.21