Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00310 ATGATCAAAATCATAGAAACTTTCAATGTATCACCATCTTCACAAGAACAATTACCTTCACAAACATCACTTCCTCTCACATTTTTTGACATATTTTGGTTAAGATTACCACCTGTTCAAAGAATTTTCTTCTATGAATTTCTACACCCAAACTCACTTTTCTTCAATACCCTTCTTCCAAAACTCATAAAATCACTTTCTCATACTCTTTTTCACTTTTATCCTCTTTTGGGTCATCTCATTTGGCCACATGATTCTCACAAACCTATTATCAAACACCTTAAAGGCAACTCTCTTTTGCTTACGGTAGCTGAGTCTGATGCTGATTTCAATAATTTATCTGTAATCAATGATCCAAACGGGTTAGATGAAAAGTATGTGAGTGATTGGTTAAAGCAAGGTGGAACAAACAATAGAAGCTTAATGGTTTGGGATCTTCAGCTTCCAGAAGAGTCAACTAGAGGATTGTTTCGGTTAACTCGGTTGGATATTGAAAAGCTTAAGGAATTTGTAGTGTCAAAACAAAAGGGTACGAATGAAAATAAGAAACTTCATTTGTCAACTTTTGTGGTATCTATTGCATACACATGGGTATGTAGCGTGAAAGCAGAGGAAATTGAGAACAAAAATGTTATGCTGGCTGTGAATATTGATTGCAGGAATCGGTTGGATCAACCGGTTCTTGCAACTTATTTTGGTAATTGTATTGGAGCAAGAATGGCAATAGTTGAAACAAGTAAGTTATTGGGAGAAGATGGAATAATTGTTGCTATTGAAGTGATAAGTGAAACTTTGGAAACTCTCAAAGATGGAGTTTTGAATGGAGCTGAAAATTGGACTTCATGGTTACTTGAAGGTGTTGCCATTGCTGATGTCAAAACAATTGGTGCTGCTTGTTCACCTAAATTTGAGGTTTATAGTGCTGATTTTAGTTTTGGAAGACCAAAGAAAGTTGAAATGGCTTCTATAGATAGAACTGGAGCTTTTTGTATTTCTGATTGTAGAAATGGTGATGGTGTTGAGATAGGTTTTGTGTCTAAGATAAAAGCAATGGAGGCCTTTGCTTCTCTCTTTACAAAAGGCATTGCATCTTAA 1095 0.3543 MIKIIETFNVSPSSQEQLPSQTSLPLTFFDIFWLRLPPVQRIFFYEFLHPNSLFFNTLLPKLIKSLSHTLFHFYPLLGHLIWPHDSHKPIIKHLKGNSLLLTVAESDADFNNLSVINDPNGLDEKYVSDWLKQGGTNNRSLMVWDLQLPEESTRGLFRLTRLDIEKLKEFVVSKQKGTNENKKLHLSTFVVSIAYTWVCSVKAEEIENKNVMLAVNIDCRNRLDQPVLATYFGNCIGARMAIVETSKLLGEDGIIVAIEVISETLETLKDGVLNGAENWTSWLLEGVAIADVKTIGAACSPKFEVYSADFSFGRPKKVEMASIDRTGAFCISDCRNGDGVEIGFVSKIKAMEAFASLFTKGIAS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00310 364 Gene3D - 1 133 IPR023213 -
Trre13g00310 364 Gene3D - 148 363 IPR023213 -
Trre13g00310 364 PANTHER - 114 363 - -
Trre13g00310 364 Pfam Transferase family 158 356 - -
Trre13g00310 364 Pfam Transferase family 2 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00310 Trre-Chr13 2395783 2397156 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00310 149 354 Monolignol Biosynthesis Gene Families AT5G48930 23.364 9.36e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00310 - - mtr:11418791 394.815