Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00307 ATGACCAAAATCATAGAAATTTTCAATGTATCACCATCTTCAAAAGAACAATTACCTTCACAAACATCACTTCCTCTCACCTTTTTTGACTTACTTTGGTTAAGATTACCACCTGTTCAAAGAATTTTCTTCTATGAATTTCCACATCAACCCTCACTTTTCTTCAATACCCTTCTTCCAAAACTCAAAAAATCACTTTCTCATACTCTTTTTCACTTTTATCCTCTTTTGGGTCATCTCATTTGGCCACTTGATTCTCACAAACCTATTATCAAACATGTTATAGGCAACACTCTTTTGCTTACTGTAGCTGAATCTGATGCTGATTTCAATCATTTATCTGGTAATAATCTCTGTGAAGCTTCACAAATTCATGATCTTTTACCTAACTTAAATATTTCTCATGATCAAGCTTCTGTTTTGGCTCTTCAAATTACTCTTTTTCCAAACTATGGTTTTTCTATTGGTATCACTTCACACCATGCTGTTTTAGATGGTAAAACTTCAACTTCTTTTATTAAATCTTGGGCTTATTTGTGTAATAAGCTTGAAAGTGGAGAATCTGAATCAAAATCTGAATTAGAATCGCCCCTTTTATTGCCAGCTGAATTTGTTCCTTTCTTTGATAGAAAAGTAATCAATGATCCAAACGGGTTAGATGAAAAGTATGTGAGTGATTGGTTAAAGCAAGGTGGAACAAACAATAGAAGCTTAATGGTTTGGGATCTTCAACTTCCAGAAGATTCAACTAGAGGATTGTTTCAGTTAACTCGGTTGGATGTTGAAAAGCTTAAGGAATTTGTAGTGTCAAAACAAAAGGGTAGGAATGAAAATAAGAAACTTCATTTGTCAACTTTTGTGGTATCTATTGCATTTGCATGGGTATGTAGAGTGAAAGCAGAGGAAATCGAGAACAAAACTGTTATGCTGGCTGTGAATATCGATTGCAGGAATCGGTTGGATCAACCGGTTCCTGCAACATATTTTGGTAATTGTATTGGAGCAAGAATGGCAGTAGTTGAAACAAGTAACTTATTCGGAGAAGATGGACTAATTGTGGCTATTGAATCAATGAGTGAAACTTTGGAAACTCTCAAAGATGGAGTTTTGAATGGAGCTGAAAATTGGACTTCATTGTTACTTGAAGGTGTTGCCATTGCTGATGTCAAAACAATTGGTGCTGCTGGTTCACCTAAATTTGAGGTTTATAGTGCTGATTTTGGTTTTGGAAGACCAAAGAAAGTTGAAATGGCTTCTATAGATAGAACTGGAGCTTTTTGTATTTCTGATTGTAAAAATGGTGATGGTGTTGAGATAGGTTTTGTGTCTAAGAAAAAAGCAATGGAGGCCTTTGCTTCTCTCTTTACAAAAGGCATTGCATCTTGA 1386 0.3506 MTKIIEIFNVSPSSKEQLPSQTSLPLTFFDLLWLRLPPVQRIFFYEFPHQPSLFFNTLLPKLKKSLSHTLFHFYPLLGHLIWPLDSHKPIIKHVIGNTLLLTVAESDADFNHLSGNNLCEASQIHDLLPNLNISHDQASVLALQITLFPNYGFSIGITSHHAVLDGKTSTSFIKSWAYLCNKLESGESESKSELESPLLLPAEFVPFFDRKVINDPNGLDEKYVSDWLKQGGTNNRSLMVWDLQLPEDSTRGLFQLTRLDVEKLKEFVVSKQKGRNENKKLHLSTFVVSIAFAWVCRVKAEEIENKTVMLAVNIDCRNRLDQPVPATYFGNCIGARMAVVETSNLFGEDGLIVAIESMSETLETLKDGVLNGAENWTSLLLEGVAIADVKTIGAAGSPKFEVYSADFGFGRPKKVEMASIDRTGAFCISDCKNGDGVEIGFVSKKKAMEAFASLFTKGIAS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00307 461 Gene3D - 245 460 IPR023213 -
Trre13g00307 461 Gene3D - 1 239 IPR023213 -
Trre13g00307 461 Pfam Transferase family 11 453 - -
Trre13g00307 461 PANTHER - 2 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00307 Trre-Chr13 2385178 2386563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00307 42 451 Monolignol Biosynthesis Gene Families AT5G48930 23.697 4.48e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00307 - - mtr:11418791 746.117