Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00305 ATGGCTTCCAACAACAACATTAAAATTCACGAACACTTTAAGGTTGTTCCACAATCATCAACCAAAACAACATCAATTCCTCTCACTTCCTTGGACATATTTTGGCTAAGGTTCCATCCGGTAGAGAGAATTTTCTTTTACACCCTCCCAAATTCACAGTCACACCCTTCTTTTTTCTTCCAAACAATTGTTCCAAATCTCAAATCTTCACTCTCTTTGAACCTCCAACACTTTCTTCCTATAGCCGGCAAAATTATTTGGGATTCCGAATCACAAAATCCAAAAATTCAATATACACCAAATGATGGTGTTTCATTGTTCATTGCAGAGTCTGATTCAGATTTCAATCATGTCATTGAAAACACACCACATGAATCTTCTTTGTCTCGTTCTTTTATACCTCACTTAGAATCAATAGATTCTTTTGCTTCTATTATCGCGATTCAAATAACCTTTTTTCCGAAAAGTGGTTTTTCCATTGGAATAACCACTCACCATGCTGTTTTTGATGGAAAATCTTCAACCATGTTCATCAAAGCTTGGGCTTATCTATCCAAAAAAACTATCGAAACGAATGAATCACCCACATTGTTACCTGAGTTAGAGCCTTTGTTCAACAGAGAAATCATGAAAGACCCAAAACTCAAGATGCTCCCAATTGAAAAAGGAAATGAAAAAAGTTTAGAGATTCTCCCTTTTGAAGCAAAACTCAAAGACTATGTTCGCGCTACTTTTGAGCTCAAACATGAAGATTTGGATAAGATAAAGCAAAGGGTGTTATCGACATGGGAAATATCCGATAAAAGAGAATCAAAGCCACAAAATCTATCATCGTTTGTCGTCACTTGTGCTTATTCTCTCGTTTGTATTGCGAAAGCGATTCATAAAGTTGAAAATGATAAAGAGAAATTTGCTTTTGCATTCGGTGTAGATTGCAGAGCAAGGTTAGAACCACCATTACCAAATAACTATTTTGGAAATTGTGTTTCGGGACAATTCATTGATACACAACCGTTGGATTTTATAAAAGACGATGGTATTTTTTTAGTTGCTAAGAGTATTTACGAGAGAATAAATATAATAAACGAAAAAGGTGCGCTCGAAAGGAATATTAATAATGTATGTGATAAATTTTCTCTTTTGTCAAGTGAAGGTTTTGAAGTTATGGGAGTGGCAGGGTCTAATAGATTTTGTGTGTATGAGATTGATTTTGGTTGGGGAAGGCCAGAAAAGGTGGAGATAGTTTCTATTGATAGAGGTTTAACAATTGGCTTGGCCAAGAGAAATGATGGGATTGAAATTGGTGTTGTTCTTAATAAACATGTGATGGATCACTTTAGCACTTTGTTTCTTGAAGGATTATGTACTAATTGA 1374 0.3523 MASNNNIKIHEHFKVVPQSSTKTTSIPLTSLDIFWLRFHPVERIFFYTLPNSQSHPSFFFQTIVPNLKSSLSLNLQHFLPIAGKIIWDSESQNPKIQYTPNDGVSLFIAESDSDFNHVIENTPHESSLSRSFIPHLESIDSFASIIAIQITFFPKSGFSIGITTHHAVFDGKSSTMFIKAWAYLSKKTIETNESPTLLPELEPLFNREIMKDPKLKMLPIEKGNEKSLEILPFEAKLKDYVRATFELKHEDLDKIKQRVLSTWEISDKRESKPQNLSSFVVTCAYSLVCIAKAIHKVENDKEKFAFAFGVDCRARLEPPLPNNYFGNCVSGQFIDTQPLDFIKDDGIFLVAKSIYERINIINEKGALERNINNVCDKFSLLSSEGFEVMGVAGSNRFCVYEIDFGWGRPEKVEIVSIDRGLTIGLAKRNDGIEIGVVLNKHVMDHFSTLFLEGLCTN 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00305 457 Pfam Transferase family 7 447 - -
Trre13g00305 457 SUPERFAMILY CoA-dependent acyltransferases 271 447 - -
Trre13g00305 457 Gene3D - 2 230 IPR023213 -
Trre13g00305 457 PANTHER - 7 454 - -
Trre13g00305 457 Gene3D - 237 456 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00305 Trre-Chr13 2381254 2382627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00305 7 452 Monolignol Biosynthesis Gene Families AT5G48930 24.211 2.51e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00305 - - tpra:123889238 654.825