Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00304 ATGGCTTCCACCAACAATATTAAAATTCATGAACACTTGAAAGTTGTTCCTCCACCATCAACCCAAACATCAACAACACCTCTCACTTTCTTTGACATATTTTGGCTAAGGTTTCATCCTGTCGAAAGAATCTTCTTCTACACCCTCCCAAATTCACAATCACACCCTTCTTTTTTCTTCCAAAACATTGTTCCAAAACTCAAAACCTCACTTTCCTTAACCCTCCAACACTTTCTCCCTTTAGCCGGTAAAATAATTTGGCCTTCTGATTCTCCCAAACCATTCATTCAATTCAATCCCAATCACGATGACGGTGTTTCTTTACTCATTGCAGAGTCTGATTCAGATTTCAATCATGTCATCGAAAACTCACCCCATGAAGCTTCTTTGTCTCATTCATTTGTACCTCACTTAGAATCAACAGATTCTTTTGCTTCTATTATCTCAATTCAAATAACCCTTTTTCCAAAAAGTGGTTTTTCCATTGGAATAAGCTCACACCATGCTGTTCTCGATGGAAAATCATCAACTATGTTCATCAAAGCTTGGGCTTATCTATGCCGCAAAATCATTGAAAACGAAGAATCGCCAATTTTGTTGCCAAAGTTAGAACCATTATTCGATAGGGAAATCATCGAAGATCAAAATGGACTTGGTGACACATTCACAAATAATTGGATCGAGATCATGGAAAAGATGTTCCCAAATGAAAAAATAAATAAACAAACTGTGAAGATTTTCCCTTTTGAACCAAAACTCGAAGACTATGTCCGTGCTACGTTTGAACTCACACGCGAAGATTTGAACAAGATAAAACAAATGGTTTTATCGAAATGGGAAATATTCGATACAAATGAAACAAAGCCTCAAACACTATCATCTTTTGTTCTCACTTGTGCTTATTCGCTCGTTTGTTTTGCAAAAGCGATTCATGGATTTGAAAAAGAGAAAGAGAAGTTTGTTATGGGGTTCAACGTAGATTGTAGAGCAAGGTTAGTGCCCCCAATACCAAATAACTATTTTGGAAATTGTGTATGGGGACATTTAGTTGATACAAAACCATTCGATTTCATAAAAGAAGATGCGGTGTTTTTAGTTGCTAAGAGTATTCATGAGAAAATAAAGATGATTAATGAAAAGGGTGTTCTAGAAGGTGCTGAAAATTTATTTGATAATTTTCAATCTAAAATAAGTGAAGGATTTCAAATTATGGGATTAGCGGGGTCTAATAGATTTGGTGTTTATGAGATTGATTTTGGTTGGGGAAGGCCAGAAAAGGTGGAGATAGTGTCAATTGATAGAGGTTTAACTATTGGTTTGGCTGAGAGCAAAGATGGGAAAGGTGGTGTTGAAGTTGGTCTTGTTTTGAATAAACATGTAATGGATCTCTTTAGCACATTGTTTCTTGAAGGACTTTGTGTTAATTGA 1428 0.3592 MASTNNIKIHEHLKVVPPPSTQTSTTPLTFFDIFWLRFHPVERIFFYTLPNSQSHPSFFFQNIVPKLKTSLSLTLQHFLPLAGKIIWPSDSPKPFIQFNPNHDDGVSLLIAESDSDFNHVIENSPHEASLSHSFVPHLESTDSFASIISIQITLFPKSGFSIGISSHHAVLDGKSSTMFIKAWAYLCRKIIENEESPILLPKLEPLFDREIIEDQNGLGDTFTNNWIEIMEKMFPNEKINKQTVKIFPFEPKLEDYVRATFELTREDLNKIKQMVLSKWEIFDTNETKPQTLSSFVLTCAYSLVCFAKAIHGFEKEKEKFVMGFNVDCRARLVPPIPNNYFGNCVWGHLVDTKPFDFIKEDAVFLVAKSIHEKIKMINEKGVLEGAENLFDNFQSKISEGFQIMGLAGSNRFGVYEIDFGWGRPEKVEIVSIDRGLTIGLAESKDGKGGVEVGLVLNKHVMDLFSTLFLEGLCVN 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00304 475 Gene3D - 6 238 IPR023213 -
Trre13g00304 475 PANTHER - 7 472 - -
Trre13g00304 475 FunFam Phenolic glucoside malonyltransferase 1 253 474 - -
Trre13g00304 475 Gene3D - 253 474 IPR023213 -
Trre13g00304 475 SUPERFAMILY CoA-dependent acyltransferases 292 441 - -
Trre13g00304 475 FunFam Phenolic glucoside malonyltransferase 1 7 235 - -
Trre13g00304 475 Pfam Transferase family 8 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00304 Trre-Chr13 2378959 2380386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00304 19 470 Monolignol Biosynthesis Gene Families AT5G48930 23.707 1.42e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00304 - - tpra:123889238 851.277