Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00303 ATGGCTTCCAACAACATTAAAATTCATGAACACTTGAAAGTTGTTCCTCCACCATCAACCCAAACATCAACAACACCTCTCACTTTCTTTGACATATTTTGGCTAAGGTTTCATCCGGTAGAAAGAATTTTCTTTTACACCCTCCCTAATTCACAATCACACCCTTCTTTTTTCTACCAAAATATTGTTCCAAAACTCAAAACCTCACTTTCTTTGACCCTCCAACACTTTCACCCTTTAGCCGGTAAAATAATTTGGCCATCTGATTCTCCCAAACCATTCATCCAATTCAATTCCAATGAGGATGATGGTGTTTCCTTACTCATTGCAGAGTTTGATTTAGATTTCAATCATGTCGTTGAAAATTCACCACATGAAACTTCTTTGTCTCGTTCTTTTGTACCTCACTTAGAATCTACAGATTCTTTTGCTTCTCTTATTTCAATTCAAATAACTCTTTTTCCAAAAAGTGGGTTTTCTATTGGAATAAGCACACATCATGCTGTTCTTGATGGAAAATCTTCAACTATGTTCATTAAAGCTTGGGCTTATCTATGCAACAAAATCATTGAAACCGAAGAATCGCCAATTTTGTTGCCAAATTTAGAACCTTCATTGGACAGGGAAATCATCAAAGATCAAAATGGACTTGGTGATACATTCACAAATAATTGGATCGAGATCATGGTCAAAATGTTCCCAAATGAAAAAGGTAACGAACGATGCTTGAAGATTTTACCATTTCAAGCAAAATTAGATGATTATGTTCGTGCTACGTTCGAGCTCACACGTGAAGATTTGAATAAGATAAAGCAAATTGTGTTATCCAAATGGGAAATATTTGATACAAATGAATCAAAGCCTCAAACACTATCATCTTTTGTTCTCGCTTGTGCTTATTCGCTCGTTTGTCTTGCAAAATCGATTCATGGAGTCGAAAAAGAGAAAGAAAAATTTGCTTTTGCTTTCACCGTAGATTGTAGAGCAAGGTTAGAACCACCAATACCAAATAACTATTTTGGAAATTGTGTATGGGGACACTTTGTTGATTCAAAACCATATGATTTCATAAATGAAGATGGAGTGTTTTTAGTTGCTAAGGGTATTCATGAGAAAATATTGATGATAAAAGAAAAGGGTGCTCTTGAAGGAACTAATGATGCATTTAATAAATATATTTCTATGGGAAGTGAAGGAATTGAAATTATTGGAGTGGCGGGGTCTAATAGATTTGGTGTTTATGAGGTTGACTTTGGTTGGGGAAGGCCAGAAAAGGTGGAGATAGTATCAATTGATAGAGGTTTAACCATTGGTTTGGCTGAGGGCAAAAATGGCAAAGGTGGAATTGAAGTTGGGTTGTCTCTTAATAAGCATTCCATGGATCTCTTTAGCACTTTGTTTCTTGAAGGTTTGCATTAA 1419 0.3552 MASNNIKIHEHLKVVPPPSTQTSTTPLTFFDIFWLRFHPVERIFFYTLPNSQSHPSFFYQNIVPKLKTSLSLTLQHFHPLAGKIIWPSDSPKPFIQFNSNEDDGVSLLIAEFDLDFNHVVENSPHETSLSRSFVPHLESTDSFASLISIQITLFPKSGFSIGISTHHAVLDGKSSTMFIKAWAYLCNKIIETEESPILLPNLEPSLDREIIKDQNGLGDTFTNNWIEIMVKMFPNEKGNERCLKILPFQAKLDDYVRATFELTREDLNKIKQIVLSKWEIFDTNESKPQTLSSFVLACAYSLVCLAKSIHGVEKEKEKFAFAFTVDCRARLEPPIPNNYFGNCVWGHFVDSKPYDFINEDGVFLVAKGIHEKILMIKEKGALEGTNDAFNKYISMGSEGIEIIGVAGSNRFGVYEVDFGWGRPEKVEIVSIDRGLTIGLAEGKNGKGGIEVGLSLNKHSMDLFSTLFLEGLH 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00303 472 PANTHER - 6 471 - -
Trre13g00303 472 Gene3D - 252 472 IPR023213 -
Trre13g00303 472 SUPERFAMILY CoA-dependent acyltransferases 287 438 - -
Trre13g00303 472 Pfam Transferase family 7 464 - -
Trre13g00303 472 FunFam Phenolic glucoside malonyltransferase 1 252 472 - -
Trre13g00303 472 Gene3D - 6 235 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00303 Trre-Chr13 2373602 2375020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00303 18 469 Monolignol Biosynthesis Gene Families AT5G48930 23.110 5.17e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00303 - - tpra:123889238 812.372