Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00302 ATGGCTTTTAACAACAATATCAAAATCCATGAACACTTGAAAGTTGTTCCTCCATCATCAACCCAAACCACAACAATCCCTCTCACTTTCTTCGACATATATTGGCTAAAATTCCATCCAGTAGAACGCATTTTCTTCTACACCCTCCCAAATTCACAATCACACCCTACTTTCTTTTATCAAAAACTTGTTCCAATTCTCAAATCATCACTCTCTTTAAGCCTCCAACACTTCCTCCCTTTAGCCGGTAAAATCATTTGGCCCTCCGAATCTCCACAACCAATAATCCAATACACCCCAAATGACAGTGTTTCTTTACTCATTGCAGAGTCTGATGCAGATTTCGACCGTGTCATTGAAAAGTCGCCCCATGAAGCTTCTTTGTCTCGATCTTTTATACCTCACTTAGAATCAACAGATTCTTTCGCTTCTATTATCTCAATCCAAGTCACTTTTTTCCCAAATAGTGGCATTAGCATCGGAATTAGCGCACATCATGCTATTCTCGATGGAAAATCTTCAACCATGTTCATCAAAGCTTGGGCTTATTTGTGCAACAAAACAATTGAAACCGAAGAAGAATCACCAACTTTATTGCCAGAGTTAGAACCTTCGTTCAATAGGGAAATCATCAAAGACCCAGATGAACTAGGTGTTACATTCACAAATAACTGGATCAAGATCATATCTAAGATGCTCCCAAATGAAAAAGGAAACATAAAAAGCTTGAAGATTTTAGGTTTGGAGCCAAAACTCGAAGACTCAGTTCGTGCCACGTTCAAGATCACACATGAAGATTTGAATAAGATAAATCGAATGGTGTTAGCCAAATGGGAAGGATTCGATAAAAATGAACCAAAGCCACACAATCTATCATCATTCGTTCTCGCTTGTGCTTATTCGCTCGTTTGTTTTGCAAAAGCGATTCATGGAGTTGAAAAGGAGAAAGAAAAGTTTGCGTTTGTGTTCGCTGTAGATGGAAGACGAAGGTTAGAGCCACCAATACCGAATAACTATTTTGGAAATTGTGTATTAGGACATTTCATTGATACACAACCATTGGATTTCATTAAAGAAGATGGAGTTTTTTTAGTTGCTAAGAGTATTCATGATAAAATAAAAATGATAAATGATAAAGGTGTTCTTGAAGGAGTTAAGGAAAGGCCTTCTAAATATACTTCTTTGTCAAGTGAAGGCTTTCAAATTATAGGACAAACGGGGTCTAATAGATTTGGTGTTTATGGAATTGATTTTGGCTGGGGAAAGCCTACAAAGGTGGAGATAATATCAGTGGATAGAGGTTTAAACATTGGTTTGGCAGAGAGCAAAAATGAGAGTGGAGGAGTTGAAGTTGGGCTTGTTCTAAATAAACATGTGATGAATCTATTTAGTATTTTGTTTCATGAAGGACTTTGCATTAATTGA 1425 0.3712 MAFNNNIKIHEHLKVVPPSSTQTTTIPLTFFDIYWLKFHPVERIFFYTLPNSQSHPTFFYQKLVPILKSSLSLSLQHFLPLAGKIIWPSESPQPIIQYTPNDSVSLLIAESDADFDRVIEKSPHEASLSRSFIPHLESTDSFASIISIQVTFFPNSGISIGISAHHAILDGKSSTMFIKAWAYLCNKTIETEEESPTLLPELEPSFNREIIKDPDELGVTFTNNWIKIISKMLPNEKGNIKSLKILGLEPKLEDSVRATFKITHEDLNKINRMVLAKWEGFDKNEPKPHNLSSFVLACAYSLVCFAKAIHGVEKEKEKFAFVFAVDGRRRLEPPIPNNYFGNCVLGHFIDTQPLDFIKEDGVFLVAKSIHDKIKMINDKGVLEGVKERPSKYTSLSSEGFQIIGQTGSNRFGVYGIDFGWGKPTKVEIISVDRGLNIGLAESKNESGGVEVGLVLNKHVMNLFSILFHEGLCIN 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00302 474 Gene3D - 251 472 IPR023213 -
Trre13g00302 474 Gene3D - 7 236 IPR023213 -
Trre13g00302 474 Pfam Transferase family 7 464 - -
Trre13g00302 474 PANTHER - 7 471 - -
Trre13g00302 474 FunFam Phenolic glucoside malonyltransferase 1 7 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00302 Trre-Chr13 2367762 2369186 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00302 7 469 Monolignol Biosynthesis Gene Families AT5G48930 24.109 2.24e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00302 - - tpra:123889238 698.738