Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00298 ATGGCTTCTCCAAACAACCACATCAAAATCCATGAAGAATGCAAAGTTGCTCCTCATTCTTCAACCCAATTATCTCTTCCTCTCACTTTCTTTGACTTGATTTGGCTAAGGTTCCATCCAGTAGAACGCATCTTTTTCTACACCCTCCAAAATTCACAATCACACCCTACTTTCTTCTTCCAAAATCTTGTTCCAAAACTCAAATCTTCACTCTCTTTAACCCTCCAACACTTCCTCCCTTTAGCCGGTAACATTGTTTGGCCTTCCGATTCTCCAAAACCATTCATCCAATTCAATCCAAACGATGGTGGAGTTTCTTTGCTCTTAGCCCAGTGTGATGATGATGATATAGACTTCAATAAAATCTTGGAGCACAATTCGTCTCATGAAGCTTCTTTGTCTCGTTCTTTTGTACCGGACTTAGAATCAACCGATTCTTTTGCGTCTATTATCTCAATTCAAATAACTCTTTTTCCCAAAAGTGGTTTTTCCATTGGAATAAGCACACACCATGCCGTTCTTGATGGAAAATCTTCAACCATGTTCGTTAAAGCTTGGGCTTCTATATGTAAATCTCTTGAGGAAACAAATTCACCAAATTTGGAACCTTTTTTAGAACCCATTTTGGAAAGGGAAGTAATCAAAGATCCAAAGGATCTTGAGAATGTGTTCATAAATACAAAAGCAATACAACAATCCGAAAGCGATAAAAAGCAAAAATTTTCATTTGGTTTTCCCGTAGATTGTAGAGATAGATTAGATCATCCAATTCCCGAAAACTATTTCGGAAATTGTGTATCTAATCATATAGTTGATACTGAGCCAGAAGATTTTACAAAAGAGGATGGTGTGGTGATTGTTGCTAAGAAAATTTATGGTAAAATAAAAAATATGGACAAGGGTGTTCTTGATGGATTAGATACATTAATTTATAAATTAATGGCTATGATTGGTGAAGGAATTAAAGGAATGGGAGTTGCTGGATCAACAAAGTTTGGAGTATATGAGATTGATTTTGGTTTTGGAAGGCCTGAAAAAGTGGAGATTACTTCAATTGATAGAGGATTAACAATTGGATTAACAGAAAGTAAGGATTTGAAAGGTGGTGTTGAAGTTGGGCTTGTTCTTAATAAGCATGTGATGGATTTGTTTCATACCATTTTTCATGAAGGCATATGCTTTGATTCATGA 1191 0.3585 MASPNNHIKIHEECKVAPHSSTQLSLPLTFFDLIWLRFHPVERIFFYTLQNSQSHPTFFFQNLVPKLKSSLSLTLQHFLPLAGNIVWPSDSPKPFIQFNPNDGGVSLLLAQCDDDDIDFNKILEHNSSHEASLSRSFVPDLESTDSFASIISIQITLFPKSGFSIGISTHHAVLDGKSSTMFVKAWASICKSLEETNSPNLEPFLEPILEREVIKDPKDLENVFINTKAIQQSESDKKQKFSFGFPVDCRDRLDHPIPENYFGNCVSNHIVDTEPEDFTKEDGVVIVAKKIYGKIKNMDKGVLDGLDTLIYKLMAMIGEGIKGMGVAGSTKFGVYEIDFGFGRPEKVEITSIDRGLTIGLTESKDLKGGVEVGLVLNKHVMDLFHTIFHEGICFDS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00298 396 Gene3D - 226 394 IPR023213 -
Trre13g00298 396 Gene3D - 7 225 IPR023213 -
Trre13g00298 396 PANTHER - 8 234 - -
Trre13g00298 396 Pfam Transferase family 231 386 - -
Trre13g00298 396 Pfam Transferase family 14 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00298 Trre-Chr13 2345074 2346516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00298 8 390 Monolignol Biosynthesis Gene Families AT5G48930 22.616 7.45e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00298 - - tpra:123889238 326.635