Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00297 ATGGCTTCTCCAAACAACCACATCAAAATCCATGAAGAATGCAAAGTTGCTCCTCATTCTTCAACCCAATTATCTCTTCCTCTCACTTTCTTTGACTTGATTTGGCTAAGGTTCCATCCAGTAGAACGCATCTTTTTCTACACCCTCCAAAATTCACAATCACACCCTACTTTCTTCTTCCAAAATCTTGTTCCAAAACTCAAATCTTCACTCTCTTTAACCCTCCAACACTTCCTCCCTTTAGCCGGTAACATTGTTTGGCCTTCCGATTCTCCAAAACCATTCATCCAATTCAATCCAAACGATGGTGGAGTTTCTTTGCTCTTAGCCCAGTGTGATGATGATGATATAGACTTCAATAAAATCTTGGAGCACAATTCGTCTCATGAAGCTTCTTTGTCTCGTTCTTTTGTACCGGACTTAGAATCAACCGATTCTTTTGCGTCTATTATCTCAATTCAAATAACTCTTTTTCCCAAAAGTGGTTTTTCCATTGGAATAAGCACACACCATGCCGTTCTTGATGGAAAATCTTCAACCATGTTCGTTAAAGCTTGGGCTTCTATATGTAAATCTCTTGAGGAAACAAATTCACCAAATTTGGAACCTTTTTTAGAACCCATTTTGGAAAGGGAAGTAATCAAAGATCCAAAGGATCTTGAGAATGTGTTCATAAATAGTTGGAATAGAATCTCATCACATTTTGATAAAAGCAATGTGAAAAGCATAAAGATTATGTCAAACATGTTTCAACCAATCATTAAGGATTCGAACAATATTGTAGAAGGAGCACAAGAACAAGAACATCCTAAGAAATTATCAAGTTTTGTTCTTACATGTTCTTATGTGTCTGTTTGCATAGCAAAAGCAATACAACAATCCGAAAGCGATAAAAAGCAAAAATTTTCATTTGGTTTTCCCGTAGATTGTAGAGATAGATTAGATCATCCAATTCCCGAAAACTATTTCGGAAATTGTGTATCTAATCATATAGTTGATACTGAGCCAGAAGATTTTACAAAAGAGGATGGTGTGGTGATTGTTGCTAAGAAAATTTATGGTAAAATAAAAAATATGGACAAGGGTGTTCTTGATGGATTAGATACATTAATTTATAAATTAATGGCTATGATTGGTGAAGGAATTAAAGGAATGGGAGTTGCTGGATCAACAAAGTTTGGAGTATATGAGATTGATTTTGGTTTTGGAAGGCCTGAAAAAGTGGAGATTACTTCAATTGATAGAGGATTAACAATTGGATTAACAGAAAGTAAGGATTTGAAAGGTGGTGTTGAAGTTGGGCTTGTTCTTAATAAGCATGTGATGGATTTGTTTCATACCATTTTTCATGAAGGCATATGCTTTGATTCATGA 1374 0.3523 MASPNNHIKIHEECKVAPHSSTQLSLPLTFFDLIWLRFHPVERIFFYTLQNSQSHPTFFFQNLVPKLKSSLSLTLQHFLPLAGNIVWPSDSPKPFIQFNPNDGGVSLLLAQCDDDDIDFNKILEHNSSHEASLSRSFVPDLESTDSFASIISIQITLFPKSGFSIGISTHHAVLDGKSSTMFVKAWASICKSLEETNSPNLEPFLEPILEREVIKDPKDLENVFINSWNRISSHFDKSNVKSIKIMSNMFQPIIKDSNNIVEGAQEQEHPKKLSSFVLTCSYVSVCIAKAIQQSESDKKQKFSFGFPVDCRDRLDHPIPENYFGNCVSNHIVDTEPEDFTKEDGVVIVAKKIYGKIKNMDKGVLDGLDTLIYKLMAMIGEGIKGMGVAGSTKFGVYEIDFGFGRPEKVEITSIDRGLTIGLTESKDLKGGVEVGLVLNKHVMDLFHTIFHEGICFDS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00297 457 Gene3D - 7 236 IPR023213 -
Trre13g00297 457 PANTHER - 8 453 - -
Trre13g00297 457 Pfam Transferase family 14 447 - -
Trre13g00297 457 SUPERFAMILY CoA-dependent acyltransferases 288 428 - -
Trre13g00297 457 Gene3D - 237 454 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00297 Trre-Chr13 2345074 2346516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00297 8 451 Monolignol Biosynthesis Gene Families AT5G48930 23.377 5.86e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00297 - - tpra:123889238 552.747