Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00254 ATGATGGCAGAGGAATGTGTTGATGTACCAGTGATTTCTGAAGAAGTGACTATGTCGCGCGTCGTTGAATTAAGGCACTCATCTTCCGCAAACAATGAAGACAAAGTTGTTCCTCATTATCGTCGAGCTTCGACTGGTTCCTGTCACGATTTTTGCAAATATGGGAAGAACATTGCAGTTGAAGCAAAGAAAAGAAGTTTCATACCTAAGTTAGCCGAAAGAAAACAACTACATCAAAGTTCAGAGAAGAACATTGGTGAAGTAGTAGTCACATCAGGTGTCAAACTTCGAGCATCAGCTGATTCTGAGCCAATGAAGAAGTCATTGGTCAAACGTAGAGAATCAACTGATTCTCAGCTCCGGGTTTCTAATGCCTCAGACACAACCAAGGTGATTAAAACTGGATCGGGTCGGCTGGTTCAACCTGACAATGAAGTTGTGGTAAACAAGAAGAAAGCATCATTGGTCAAAGTGAAAAATTCATTACCACTTCAAAATGTGCAAAATTCTTCTACCTACAAAACAAGGAGGCAAGAGGTTTCATCAACTTCCAAGAAGGAAGAACCTCTATTGAAATCAACCTTTCAAACGGTGAAAACTAATCCGATATCAACTTCTCAGATGGCCAAAACTTCATCAAAATCCACTTCCAAGAAGACGCGGACTTCAATGAATCTAGATTCCAGCAAAGTAGCTTCACCAAGGGCTTCCTTATTGAAATCTTCTCAAAAAAGAAATGCAGGTATTAATATACACAAGAGCCTGAAAACTGCGTCGCGTGTTAAGAATCATCCAATGCCAAGAAAAGTTGAACCTGAGGAACAATACAATGAGGCCGAGGAAAAGACTTTGTATGTCATCATAGAAAGTGAAGACCAAACATTTCAATCTGATCAAGAGGAACCCAAATATGCAACAAGTGAACTTGAGGAGGATTCTTGTTTAGGAAACAATGGAAAAGAAAACATGGACAATTTGGAGATTTTGGATTTGGAAGTTGAGGAAAATGAAAAGCCTCAAAAGGGTGAGACTGAAAATTTAGAGGTTTTGGATTTGGAAGTTGAGGATAATGAGAAGCCTCAAAAGGGCGAGACTGAAAATTTGTTCGAAACTCAAATTGAGAAAAATAGTTTCGAAAGTATAAAAGTCTCGAAGGACAACAACGCTACTGATGATAAGGTTGATGCTGATGAAACTGTTGCTATAACTGGTTTTGAAAAGGTTGTTTTAAGACATCAAGATGTGAAGGGAAAGAAAGATGAACAAGTATTGTCCAATAATGTGATTGAGGAAACAGCTAGTAAACTTGTTGAAATTCAGAGGAGTAAGGTGAAAGCTTTGGGTTTCAAGGCTCTGCTGAAACGTCTTAATTCAGGTGGATAA 1383 0.3876 MMAEECVDVPVISEEVTMSRVVELRHSSSANNEDKVVPHYRRASTGSCHDFCKYGKNIAVEAKKRSFIPKLAERKQLHQSSEKNIGEVVVTSGVKLRASADSEPMKKSLVKRRESTDSQLRVSNASDTTKVIKTGSGRLVQPDNEVVVNKKKASLVKVKNSLPLQNVQNSSTYKTRRQEVSSTSKKEEPLLKSTFQTVKTNPISTSQMAKTSSKSTSKKTRTSMNLDSSKVASPRASLLKSSQKRNAGINIHKSLKTASRVKNHPMPRKVEPEEQYNEAEEKTLYVIIESEDQTFQSDQEEPKYATSELEEDSCLGNNGKENMDNLEILDLEVEENEKPQKGETENLEVLDLEVEDNEKPQKGETENLFETQIEKNSFESIKVSKDNNATDDKVDADETVAITGFEKVVLRHQDVKGKKDEQVLSNNVIEETASKLVEIQRSKVKALGFKALLKRLNSGG 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00254 460 MobiDBLite consensus disorder prediction 100 124 - -
Trre13g00254 460 MobiDBLite consensus disorder prediction 100 118 - -
Trre13g00254 460 MobiDBLite consensus disorder prediction 167 242 - -
Trre13g00254 460 PANTHER EMB|CAB62594.1 19 447 - -
Trre13g00254 460 MobiDBLite consensus disorder prediction 187 242 - -
Trre13g00254 460 Pfam Plant calmodulin-binding domain 348 447 IPR012417 GO:0005516
Trre13g00254 460 SMART CaM_binding_2 354 454 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00254 Trre-Chr13 2037762 2042148 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00254 - - tpra:123888678 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g00508 11 4080265 4082124 Trre13g00254 13 2037762 2042148 PCT