Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00184 ATGTCAGAAAAACTTCAAAGCAACTCTCCCTTAAGTGTGCCTTTACTATCTGAGTGGAAGTTAGGATATTCCATAGATGAGGAGAAAGTCATAGCCTCTCATCCTTCAGACAAAAATGCATTATCTTTCGTTAGAACATGTCTTAATGGACTCAATGCAATTTCAGGTGTTGGAATATTATCAGTTCCATATGCTTTAGCCTCAGGAGGATGGTTAAGTTTAGGACTTTTATTTTTTATTGCAGCAGTAGCATTTTACTCAGGCATATTGATGAAAAGATGCATGGAAAAAAATTCCAACATAAGAACTTATCCTGATATAGGTGAACTTGCATTTGGAAAAACAGGAAGATTAATAGTATCAATTTCAATGTACACAGAACTATACTTGGTTTCAATAGGGTTCTTAATTCTAGAAGGAGACAACTTAAGTAACTTATTTCCTATTGAAGAGTTTCAAGTAGTTGGTTTATCAATTGGTGCAAAGCAATTTTTTGTGATTTTGGTTGCACTAATTATTTTGCCTACAATTTGGTTGGATAATTTGAGTCTCCTTTCATATGTATCTGCAAGTGGTGTTTTTGCTTCTATAATCATAATTTTCTCAATATCATGGACTGGAGCATTTGATGAAGTTGGATTTCATGAAAAGGGTGATATTGTAAATTGGAATGGGATCCCTACAGCTGTTAGCTTGTATGCTTTTTGTTATTGTGCTCATCCTGTCTTCCCTACTCTCTACAATTCCATGAGGAACAAACATCAATTCTCTAATGTCCTAGTTGTATGCTTTATATTAACCACTATTGGTTATGCATCGATGGCAATAATTGGTTACTTAATGTTTGGTTCAAAAGTTGAATCACAAATAACATTAAACTTACCACTAAACAAAATAAGTTCAAGAATAGCAATATACACAACTTTGGTGAATCCAATAACCAAATTTGCTTTGATGGCAACACCAATTACAAATGCTTTGAAAGAATTACTTCCAAGTACATACAAGAATAACAAAATGACCAATATCTTTGTGAGTACTGTTCTTGTAATTAGCACTGTTATTGTTGCATTGAGTGTTCCTTTCTTTGGTTCTCTCATGTCATTGGTTGGAGCATTTTTAAGTGTCACTGCCTCTATTTTGCTTCCTTGCTTATGCTACTTGAGGATTTCTGGAACTTATAGGAAATTTGGGTTTGAGACATTTGCCATAGTTGTGATAATTTTAATAGCTATTGTAATGGGAATATCTGGGACATATACTTCAGTTGTTGAAATAGTACAAAATTTGTAA 1293 0.3341 MSEKLQSNSPLSVPLLSEWKLGYSIDEEKVIASHPSDKNALSFVRTCLNGLNAISGVGILSVPYALASGGWLSLGLLFFIAAVAFYSGILMKRCMEKNSNIRTYPDIGELAFGKTGRLIVSISMYTELYLVSIGFLILEGDNLSNLFPIEEFQVVGLSIGAKQFFVILVALIILPTIWLDNLSLLSYVSASGVFASIIIIFSISWTGAFDEVGFHEKGDIVNWNGIPTAVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLVVCFILTTIGYASMAIIGYLMFGSKVESQITLNLPLNKISSRIAIYTTLVNPITKFALMATPITNALKELLPSTYKNNKMTNIFVSTVLVISTVIVALSVPFFGSLMSLVGAFLSVTASILLPCLCYLRISGTYRKFGFETFAIVVIILIAIVMGISGTYTSVVEIVQNL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00184 430 PANTHER OS05G0424000 PROTEIN-RELATED 50 412 - -
Trre13g00184 430 Pfam Transmembrane amino acid transporter protein 42 420 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00184 Trre-Chr13 1521730 1524149 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00184 27 427 Amino Acid or Auxin Permease AAAP Family AT3G28960 57.606 2.62e-172 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00184 K15015 - gmx:100794374 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00184 13 1521730 1524149 Trre13g00184 13 1521730 1524149 ECH