Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00182 ATGTACACATGGAACTATGGAAGTGTCCTAAAGTACAAAACTGAAGTTAAGGACACAATTTCATTGGATTTATTGCATGATCTTGGACCAAATCTTGGAACAGTTAGAGTTCAAGGAATAGGATTGTTATACACTGAGCTTGTTCAAGGAATTCCCTCCATTTTTGTGCAGTTTCTTCTAAGCCTTCAAGGGTCTAACATAGGATCACCGTTTGAAGTACGACGCTCTTCTAAGTCTAGTCATAATGTTGAGGGTGATCAAGCAACTCCGGACGATTAA 279 0.3907 MYTWNYGSVLKYKTEVKDTISLDLLHDLGPNLGTVRVQGIGLLYTELVQGIPSIFVQFLLSLQGSNIGSPFEVRRSSKSSHNVEGDQATPDD 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00182 92 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 63 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre13g00182 92 MobiDBLite consensus disorder prediction 72 92 - -
Trre13g00182 92 MobiDBLite consensus disorder prediction 77 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00182 Trre-Chr13 1508120 1508571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00182 1 62 Inorganic Solute Cotransporters AT1G60160 69.355 2.25e-26 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00182 K03549 - twl:120007554 101.679