Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00119 ATGGCAATGGGTAGTACTTCTTCATCATCTTCTTGTTGTTCTCGTTTCTGGTCATCGGCGCTCCGATCTAAACGCTTAGTCTCTCCGGCGGAGAAAGCAGCTCGCGACAGTTCCGCCCGTGGTCTCTCCCGCCGACTAGGTGTCTTCGACCTTATTCTTCTCGGGATCGGAGCTTCCATTGGTGCCGGTATCTTCGTCGTCACCGGCACCGTCGCTCGTGACACCGGACCTGCGGTGACAATAAGTTTTATACTTGCTGGAGCATCATGTGTTATAAATGCACTATGTTATGCGGAGCTAGCTTCTCGATTTCCGGCTGTAGTTGGAGGAGCATACCTATATACATATACGGCTTTTAATGAACTTACTGCTTTTCTAGTTTTTTCACAATTAATGCTTGACTATCATATTGGGGCAGCTAGCATAGCAAGAAGTTTAGCAAATTACATTGTTTCATTTCTAGGGATATTCCCTGTGTTCAAAGATAACATTCCAAATTGGATTGGACACGGTCAAGAAATCGGAGGCGTGTTCTCCATCAATATCTTAGCTCCAATTCTCCTAATGCTTCTCACTTTAATTCTCTGTCTTGGTGTTAAAGAATCATCAGCTGTTAATTCTTTTATGACAGTGACCAAGGTAATCATTGTTATTATCGTCATTTGTGCTGGAGCTTTTGAGGTTGATGTTTCCAACTGGTCTCCCTTTGTTCCAAATGGTATGAGAAGCGTCTTCACAGGAGCTACTGTAGTCTTCTTTGCGTATGTTGGGTTTGATGCAGTTGCCAATTCTGCTGAAGAATCTAAGAAGCCACAGCGGGATTTGCCAATAGGCATAATTGGAAGTCTCTTGGTATGTATTGCATTGTACATTGGAGTATGCTTGGTGATTACTGGAATGGTGCCATTCAATCTTCTATCAGAAGATGCTCCTTTGGCTGATGCTTTTAAATCTAAGGGTCTAAAATTTGTTTCTGTTCTGATTAGCATTGGTGCTATTGCTGGACTTACAACAGCACTCCTCGTTGGTCTCTACGTTCAGTCTCGGCTATATCTTGGACTTGGCAGGGATGGTTTGCTACCCGCAATATTTGCTAAAGTTCACCCCACACGCCACACCCCTCTTCATTCTCAGATTTGGGTTGGCTGTGTTGCCAGTATTTTGGCTGGGTTGCTTAATGTGAAAATGCTATCGCACATTCTTTCCGTTGGTACGCTGACTGGCTATTCAGTTGTCTCAGCATGCGTTGTTGTACTTCGCTGGAAGGATAGGACAAATAGCCAAGTATCATCGGCTAAGCGGCGGGAAGGTGTAATTTTCCTCATTACTGTTGCTGTTTCTGGATTTGCTGCAGGACTCTTTTTCCATTATCGAGTTTCATTTATCTTTGTGATTGCGGCTATAGTTGTTGCAGTTGCTGCTTCTCTTGCTCTTCATTTCCGCCAGGTTTATGGAGATTCAGTTGGGTTTTCTTGCCCAGGAGTTCCTATTGTGCCGAGCATTTGCATTTTCTTTAACATGTTCTTATTTGGCCAGTTACATCATGAAGCATGGGTGAGATTTGTGATTCTAAGCATTGTTATGGTTGGTGTTTATGCAATATATGGCCAGTATCATGCCGATCCTAGTGCAGATGAGAATATTGTTTATCACGAGGCTCCGGTGGAATCACCTCGATGA 1680 0.4369 MAMGSTSSSSSCCSRFWSSALRSKRLVSPAEKAARDSSARGLSRRLGVFDLILLGIGASIGAGIFVVTGTVARDTGPAVTISFILAGASCVINALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFSQLMLDYHIGAASIARSLANYIVSFLGIFPVFKDNIPNWIGHGQEIGGVFSINILAPILLMLLTLILCLGVKESSAVNSFMTVTKVIIVIIVICAGAFEVDVSNWSPFVPNGMRSVFTGATVVFFAYVGFDAVANSAEESKKPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPFNLLSEDAPLADAFKSKGLKFVSVLISIGAIAGLTTALLVGLYVQSRLYLGLGRDGLLPAIFAKVHPTRHTPLHSQIWVGCVASILAGLLNVKMLSHILSVGTLTGYSVVSACVVVLRWKDRTNSQVSSAKRREGVIFLITVAVSGFAAGLFFHYRVSFIFVIAAIVVAVAASLALHFRQVYGDSVGFSCPGVPIVPSICIFFNMFLFGQLHHEAWVRFVILSIVMVGVYAIYGQYHADPSADENIVYHEAPVESPR 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00119 559 Pfam C-terminus of AA_permease 490 539 IPR029485 -
Trre13g00119 559 Gene3D Amino acid/polyamine transporter I 42 480 - -
Trre13g00119 559 Pfam Amino acid permease 46 464 IPR002293 GO:0016020|GO:0022857|GO:0055085
Trre13g00119 559 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 37 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00119 Trre-Chr13 915519 920170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00119 8 483 Organic Solute Cotransporters AT1G05940 72.141 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00119 K03294 - gmx:100804988 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00119 13 915519 920170 Trre13g00119 13 915519 920170 ECH
Trre11g00317 11 2507959 2509554 Trre13g00119 13 915519 920170 PCT