Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00100 ATGACTTTTATCTTATACTCTCATCTCCTTTTGCTCCTAATTCCTCTTTGCTTTGCTTCATTTACTATGGGAGCCACTCTACAACAAGATGAAGTAAAAGCTCTGAAAGACATAGGTAAAACACTTGGAAAGAAGGATTGGGATTTCAGCGTTGATCCATGTAGTAGTAGTAGCTGGAAACAAGCTTCTCAAAATGCTGTTACCTGCAATTGCTCTTACCAAAATAACACTCTCTGCCATGTTCTTAGCGTTGTTCTAAAAGCACAAAACCTTTCTGGTACTCTTCCACCTGATCTTGTGAGGTTGCCTTTTCTACAAGAAATTGACCTAACCCTCAACTATCTTAATGGTACAATTCCAAAACAATGGGCCACATTAAATCTTGTAAACATTTCCTTCTATGGAAATCGTCTATCCGGTTCAATTCCAAAGGAGTTTGGAAACATCACCACACTCAAAACCTTGGTGTTGGAGTTCAACCAATTATCTGGAAATCTTCCTCCAGAACTTGGGAGTCTTTCCCAGATTGAAAGATTGCTTCTTTCCTCTAACAATTTCACTGGAGTCTTACCTGCAACATTTGCTAACCTCACTGCATTGAAGCAATTTCGAATTGGTGACAGTCAATTATCTGGAACAATACCCAACTTTATACAGAACTGGATACATCTTGAGATGCTCGTGATCCGAGGGAGTGGTTTGAGTGGGCCAATTCCTGCTGGAATTTCACTTTTGAAAAACCTCACTGACTTGACTATTACTGATTTGAATGGATCTGATTCACCTTTTCCACATCTTGAAAACATGTCAAGGTTGTCAAAATTGGAATTGAGAAGTTGCAATATCGTTGGAGCATTGCCTGATTATCTTGGAAAGTTAATTAATCTTGAAGTGATAGAACTCAGCAATAACAAATTAAGTGGACAAATCCCTACGAGCTTCAATGAGCTAAAGAACATGTATTTGCTTTTTTTATCCGGGAATCAGTTGTCTGGACCGCTGCCTGACTGGATATCTAAACCAGATTTTGTAGATCTGTCGTATAACAACTTCACTATAACAAAATTTGAGCAGCAAACATGTCAACAAGGAAGTGTGAACTTGTTTGCATCTTCTTTGAAGGGAAACAGTTTAGGAAATATTTCATGTTTGGAAAACTATCATTGTCCTAAAACTTGGTACTCTCTCAATATAAATTGTGGCGGAAAGAGCATAACATTTGATGGAAATAAGACATACGATGATGATTCAAGTGAGATGGATCCGTCAAGGTATGGTCAATTTGGAACGAACTGGGCACTAATAACTTCGGGTCACTTCTTTGATAGTGGGCGCCCTGATTACTATAAATGGTCTAATACAACAAAGCTTGCTGTGGACAATGATGCTGAACTTTACATGGATGCACGCGTTTCTCCAAATGCTCTAACTTATTATGGATTCTGCCTTGGAAACGGAAACTACACCGTCAATCTCCATTTTGCAGAAATAATGTTCAGTGATGATAAAACATTTAGTAGCATTGGAAGACGTGTATTTGACATCTACATCCAGAGAAAGTTGGTGGTGAAGGATTTCGATATTGTAAAAGAGGCAGGTGGCGTTGGTAAGGAAATTATTAAAAAATTTACTGCTGGTGTGACTAGTAATGCGTTGGAGATTCGCTTATATTGGGCTGGGAAAGGAACAACGACTATCCCATTTGGATCAGTATATGGTCCTCTTATGTCAGCTATATCAGTTGATCCCGATTTTACACCCCCATCGGAAAATAGTAGAAGCATATCGGCAGGGGTTGTGGTTGCAATTGTGGCTGCAGGAGCGATTGTTATCATCTTAATAATTGGCATAATGTGGTGGAAGGGTTGTTTAAGATTGAAATGTTTAGGATCAAGAGAGAAAAAGGCTTCACAAAGTGGCTTATTCACTTTACGACAAATCAAATCAGCAACAAACAACTTCGATGAATCTTTCAAGATTGGAGAAGGAGGATTTGGTCCAGTTTACAAGGGTGTTCTATCAGATGGCGCAATAGTAGCGATTAAGCAGTTATCTTCTAAATCAACACAAGGATCTCGTGAGTTTATTAATGAGATAGGCATGATTTCTACTTTACAACACCCTAATCTCGTTAAGCTGTATGGTTTCTGTATGGAAGATGATCAGTTGTTGTTGATATATGAATATATGGAAAACAATAGCCTTGCTCATGCTTTATTTGCCAAGAAAGAAGACCTAGAAAACCGACAATCGAGATTGGATTGGAAAACTAGGAAGAGAATTTGTATTGGCATTGCTAAAGGTTTAGCTTATCTTCATGGAGAGTCAAAAATAAAGATCATTCATAGGGACATCAAGGCCACCAATGTGTTGCTAGATAAAGATCTCAACCCCAAGATATCGGATTTTGGTTTGGCAAAGCTCAATGAAGACGACAAAACCCACATCATGAACACCAGAATAGCTGGAACTTATGGATACATGGCTCCTGAGTATGCTATGCATGGCTATTTGACGGACAAAGTAGATGTTTATAGTTTTGGAATTGTTATGTTGGAAATTGTTAGTGGAACCAACAACAGTGTTAGCCATCCTCAGGAGGAATGCTTCTCTCTTCTTGATTGGGTGCACCTCTTGAAGGAAAAAGATGATCTAATGGAACTCGTTGATCGGAAATTAGGTCAAGATTTCAAGAAAGAGGAGATAAGAATGATGATAAACGTAGCTCTTTTATGCACTAGTTTTTCGCCGTCGCTTAGGCCCTCCATGTCTTTAGTAGTAAGCATGCTTGAAGGAAGAACAAATGTTCAAGAAGTGGTTGCAGAATCAACTGAGGTATTGGATGATAAGAAAAACAAGGTGATGCAACAATATTACAAACAAATAGGTGAAAATAGCACAAGTGATGCTCAAAGCATCCAAACAGATGAATCTCATACCTTCATATATGATACAGATAATTCTGTCTTGGAATCCAGAAATTAG 2985 0.3843 MTFILYSHLLLLLIPLCFASFTMGATLQQDEVKALKDIGKTLGKKDWDFSVDPCSSSSWKQASQNAVTCNCSYQNNTLCHVLSVVLKAQNLSGTLPPDLVRLPFLQEIDLTLNYLNGTIPKQWATLNLVNISFYGNRLSGSIPKEFGNITTLKTLVLEFNQLSGNLPPELGSLSQIERLLLSSNNFTGVLPATFANLTALKQFRIGDSQLSGTIPNFIQNWIHLEMLVIRGSGLSGPIPAGISLLKNLTDLTITDLNGSDSPFPHLENMSRLSKLELRSCNIVGALPDYLGKLINLEVIELSNNKLSGQIPTSFNELKNMYLLFLSGNQLSGPLPDWISKPDFVDLSYNNFTITKFEQQTCQQGSVNLFASSLKGNSLGNISCLENYHCPKTWYSLNINCGGKSITFDGNKTYDDDSSEMDPSRYGQFGTNWALITSGHFFDSGRPDYYKWSNTTKLAVDNDAELYMDARVSPNALTYYGFCLGNGNYTVNLHFAEIMFSDDKTFSSIGRRVFDIYIQRKLVVKDFDIVKEAGGVGKEIIKKFTAGVTSNALEIRLYWAGKGTTTIPFGSVYGPLMSAISVDPDFTPPSENSRSISAGVVVAIVAAGAIVIILIIGIMWWKGCLRLKCLGSREKKASQSGLFTLRQIKSATNNFDESFKIGEGGFGPVYKGVLSDGAIVAIKQLSSKSTQGSREFINEIGMISTLQHPNLVKLYGFCMEDDQLLLIYEYMENNSLAHALFAKKEDLENRQSRLDWKTRKRICIGIAKGLAYLHGESKIKIIHRDIKATNVLLDKDLNPKISDFGLAKLNEDDKTHIMNTRIAGTYGYMAPEYAMHGYLTDKVDVYSFGIVMLEIVSGTNNSVSHPQEECFSLLDWVHLLKEKDDLMELVDRKLGQDFKKEEIRMMINVALLCTSFSPSLRPSMSLVVSMLEGRTNVQEVVAESTEVLDDKKNKVMQQYYKQIGENSTSDAQSIQTDESHTFIYDTDNSVLESRN 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00100 994 Pfam Malectin domain 395 579 IPR021720 -
Trre13g00100 994 CDD STKc_IRAK 660 932 - -
Trre13g00100 994 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 393 584 - -
Trre13g00100 994 SUPERFAMILY Protein kinase-like (PK-like) 638 931 IPR011009 -
Trre13g00100 994 Gene3D Ribonuclease Inhibitor 191 259 IPR032675 -
Trre13g00100 994 Gene3D Ribonuclease Inhibitor 31 190 IPR032675 -
Trre13g00100 994 Gene3D Phosphorylase Kinase; domain 1 626 729 - -
Trre13g00100 994 Gene3D Transferase(Phosphotransferase) domain 1 730 958 - -
Trre13g00100 994 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 965 - -
Trre13g00100 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Trre13g00100 994 Gene3D - 397 583 - -
Trre13g00100 994 FunFam Putative LRR receptor-like serine/threonine-protein kinase 730 942 - -
Trre13g00100 994 Pfam Protein kinase domain 657 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g00100 994 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 264 354 - -
Trre13g00100 994 SMART serkin_6 654 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g00100 994 Pfam Leucine rich repeat 270 330 IPR001611 GO:0005515
Trre13g00100 994 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 28 257 - -
Trre13g00100 994 SUPERFAMILY L domain-like 75 352 - -
Trre13g00100 994 ProSiteProfiles Protein kinase domain profile. 654 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g00100 994 Gene3D Ribonuclease Inhibitor 260 396 IPR032675 -
Trre13g00100 994 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 628 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00100 Trre-Chr13 823570 831559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00100 21 980 Receptor kinase-like Gene Family AT1G53420 51.639 0.0 955
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre13g00100 Pkinase 5.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00100 - - gmx:100798947 1301.19