Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00070 ATGACTACCATTTCATTCAACCACAACATCCCAAAACCAAACAACATTCATCACCAAAAGGGACACATCATTGAAGAAATTGAAGGACTAATAAAAGTTCACAAAGATGGACATGTAGAAAGGCCACAAATTGTTCCCAATGTCTCATGCAAATTTCCATCAGAAAATGGTGTAACTTCAAGAGACATTACAATCAACAAAGAAACAAATTTGCGGACACGTGTCTATCTCCCAACATCAACATTAACCTCTCACAACAACAATAACAAGCTTCCATTGCTTGTTTATTTCCATGGTGGTGGATTTTGTGTTGGTTCTGTTTCTTGGATTTGTTACCATGAATTCTTAAACAACCTTGCTTTGAAGGCAAATTGCGTGGTTGTCTCGGTTAATTACCGTTTAGCCCCTGAAAATCGTCTTCCATGTGCTTACGAAGATGCTTTCAATGCTCTCGTGTGGATCAAACATGAAGCTTTATATAATAAAAACCAAAGTTGGTGGTTGAAACATTGCAACATTTCTTCTCTTTTTCTATGTGGTGATAGTGCGGGAGCTAATATAGCTTTCAATGTTGTCGCTGCACGCATAGGATCAAATTCAAATTTGAATCCATTATCTTTAAAAGGTGTTATATTGATTCAACCTTTTTTCGGAGGAGAAGAAAGGACGCATTCCGAAAAACATTTGCATCAACCACAAAATTCAGCACTTAGTTTATCGGTTTCAGATACTTATTGGCGATTATCACTTCCTATTGGAGTTTTGGTTACGCGCGATCATCCTTATTGTAATCCTCTAGCAAATGGAATCGCTAAATTGAGAGATATGAGAACTCCTTCTATTATGATATGTGTTTCGGAATTGGATATACTTAGAGATAGAAACTTAGAGTTTTCGAATTGCTTGGTTAAAGCCGGAAAAAAAGTTGAAACTTTTGTATACAAAAGTGTTGGACATGCGTTTCAAGTGTTGCATAATTATCAACTTTCTCATGTTAGGACACAAGAAATGATATCTCATATCAAGAACTACTTGAATCAGTAA 1044 0.3602 MTTISFNHNIPKPNNIHHQKGHIIEEIEGLIKVHKDGHVERPQIVPNVSCKFPSENGVTSRDITINKETNLRTRVYLPTSTLTSHNNNNKLPLLVYFHGGGFCVGSVSWICYHEFLNNLALKANCVVVSVNYRLAPENRLPCAYEDAFNALVWIKHEALYNKNQSWWLKHCNISSLFLCGDSAGANIAFNVVAARIGSNSNLNPLSLKGVILIQPFFGGEERTHSEKHLHQPQNSALSLSVSDTYWRLSLPIGVLVTRDHPYCNPLANGIAKLRDMRTPSIMICVSELDILRDRNLEFSNCLVKAGKKVETFVYKSVGHAFQVLHNYQLSHVRTQEMISHIKNYLNQ 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00070 347 Pfam alpha/beta hydrolase fold 94 322 IPR013094 GO:0016787
Trre13g00070 347 SUPERFAMILY alpha/beta-Hydrolases 27 345 IPR029058 -
Trre13g00070 347 Gene3D alpha/beta hydrolase 15 346 IPR029058 -
Trre13g00070 347 PANTHER ARYLACETAMIDE DEACETYLASE 27 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00070 Trre-Chr13 586783 587826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00070 1 346 Carbohydrate Esterase AT5G16080 49.432 1.11e-115 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00070 - - gmx:100819429 485.337