Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00059 ATGGCTGAAATGCAATACTATATCCAACTTTTTTTAGTTTTGCTACTCTCCACCATTGCAATTATTCAAGTCATACTTACAAGAAAGAAGAACAAGAACAAGAATCATCTTACTTCACCAAGAGCCCCTCTTGCCTTACCTATCATTGGACACTTTTACCTTTTATCTAAGTTACCAGTTCACCAAAATTTTCACAATCTTTCAATTCAATATGGACCCATAATGAAACTTTTCCTAGGTTATGTCCCTTGTGTGGTAGTTTCAAGTCCAGAAATAACAAAGGAGTTTCTTAAAACTCATGAAACTTCCTTCTCAAACCGCTTGGTAAATCATGTTGTTCACTACTTATCATATGGCTCAAAAGATTTCATGTTTGCACCTTATGGTGACTATTGGAAATTCATGAAAAAGATATGCATGTCAGAGCTTCTTGGTGGAAAAACTCTTGATCAATTCAATCCCTTGAGACAACAAGAGACTTTGAGGTTACTTAATGTTTTGAAGAAGAAAGGGGAAGCCGGGGAGGCAGTTGATGTCGGTGCCGAGCTCTTGACACTAACAAATAGAATTATGACAAGGATGACAATAAGTAGAGCTTGTTGTGAAAATGATTGTGATGTTGAAGAGATTAGAAAGTTGGTTCAAGATTCTTCAGAACTTGCAGGGAAGTTTAATTTGTCTGATTTTATTTGGTTTTTTAAGAATTGGGATTTGCAGGGATTTAACAAAAGGCTAAAAGAGATGATGGAAAGGTTTGACACAATGATTGAGAGAGTGATAAGGGAGCATCAAGAGGATATGATAAAGAAAAGGAATGAAAATGGTGAAGGTGCTCATGTTAAAGATATACTTGATATTTTGTTGGAAATTCAAGAGAATGAGAACTCTAAGATGAAGTTAACTAGAGAGAATGTCAAGGCTTTCATCTTTGACATGTTTTTAGCAGGAACAGACACATCTTCTACAACAATTGATTGGGCTCTAGCTGAGTTAATTAATAAACAATCCACATTTGGTGGCAATGGAAAAGTTAACATGGAAGAGAAACCTTCTACTATCCTTAGAAGGGCTCATCCTTTGATGTGTGTCCCTATTCCTCGTTTTAATTTCTTTTCTTTTAATGAGTAA 1128 0.3546 MAEMQYYIQLFLVLLLSTIAIIQVILTRKKNKNKNHLTSPRAPLALPIIGHFYLLSKLPVHQNFHNLSIQYGPIMKLFLGYVPCVVVSSPEITKEFLKTHETSFSNRLVNHVVHYLSYGSKDFMFAPYGDYWKFMKKICMSELLGGKTLDQFNPLRQQETLRLLNVLKKKGEAGEAVDVGAELLTLTNRIMTRMTISRACCENDCDVEEIRKLVQDSSELAGKFNLSDFIWFFKNWDLQGFNKRLKEMMERFDTMIERVIREHQEDMIKKRNENGEGAHVKDILDILLEIQENENSKMKLTRENVKAFIFDMFLAGTDTSSTTIDWALAELINKQSTFGGNGKVNMEEKPSTILRRAHPLMCVPIPRFNFFSFNE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00059 375 Gene3D Cytochrome P450 24 338 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00059 375 Pfam Cytochrome P450 40 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00059 375 SUPERFAMILY Cytochrome P450 42 336 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00059 375 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00059 375 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00059 375 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g00059 375 Coils Coil 242 262 - -
Trre13g00059 375 PANTHER CYTOCHROME P450 93A3-LIKE 14 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00059 Trre-Chr13 498137 500129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00059 1 333 Cytochrome P450 AT5G06900 46.567 2.48e-97 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00059 K24188 - gmx:100805931 412.92